Gene Cagg_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2305 
Symbol 
ID7266718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2807729 
End bp2809897 
Gene Length2169 bp 
Protein Length722 aa 
Translation table11 
GC content40% 
IMG OID643567135 
Productglycosyl transferase family 2 
Protein accessionYP_002463620 
Protein GI219849187 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases
[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0138852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.273361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC CTGTCGTTAT TTTAGGTGCT GGTATAGCAG GATTAAGTAT ATCCTATTTC 
TTAGCACAGC GTGGTATTCC ATCGATAGTC TTAGAAAAAA ATCCATATTA CGGCGGACTT
GCCCGAAGCT TCCGCTGGAA CGATTTCTGG TGTGACTTTG CTGCACACCG TTTTTATGCA
CATGATCAAG AAGTGCTTGA TCGTGTACGA TCTATCACTC CAATGATTGA ACACTACCGG
CGTAGTCGTA TTTTTTTTAA GCAACGCTGG TTACGCGATC CGATAGATAT CATCGAGTTA
TTCTCACACC TATCAATGCA TGAAAGATGG CACATCTTAC AAGATTACCT CAGACGAGAC
AAAACATTAC CAGACCATTC ATTCGAACAA TATGTGGTGA AGCGGTATGG TCATGCACTA
TACGATATTT TCTTTCGCTG TTACACCGAA CGACTCTTCT CACTCTCTGG TCACGACATT
GCAGTTGAAT GGGCCATTTG GAAAGTTAGA CTATCTTCAC CACTTGATCG ACTAAAGAAC
TCAACTAGGA CAAAGTTCCG CCGATTTTAC TATCCAATAA GTGGCGGTTA TGGCGCAATT
GTTAATGGAT TATACCAAAA AATACAAGAA CAAGTAATTC TAAACGCACA AGTTACTAGT
TTTATCCGTA ATCAAAACGG GCAAGTACAA GGTGTAACGT ACCGTCGTGG CAATCAAGAG
TACGAATTAC ACGCACAACA CATTATATCT ACATTACCAC TAACAGTCAC AGCTCAATTA
TTAGGAGAAG AGATCAAAAT AAGCTACCAA AAGGTTGACG CAGTCTATTT ATTACTTAAC
AAACCTTTAA TGAGCAACAA CCACTGGTTA TACTTCATGG ATAGTTCATC AACTATCAAT
CGTCTTGTTG AATTTAAAAA TATGAGTAAC CATCAAACAC CACCAAATAC AACAGTAGTA
TGTGCAGAGG TAACTATTGA AGTACCAAAC ATCGTTGAAC GAGTAGTAAA TGATTTAGTA
CAGAGCAAGT TGATCCAACC ACATGAGGTA ATTGACACAC GTGTGATACG CGAACCATTT
GCATATCCAC GATATACTCG GGGCTATATT AATGAGGTAC AAAGGTTCCA ACAAGTATTG
CAACATTACC CGAATATACA CATTTTAGGT AGATCGGCAC AATTCACTCA TTATGAGGTC
GATGATCTAC TAGATCAGGC ATATCAAATG GCACAGCAAA TAACACAAAC ACAGCCTATT
ACAATCCAAT CCACCAATAA AGAACCGCCT GTTTGGATTG TAATTTTAAC CCTAAACAAT
TATCATGACA CCGAGGAGTG CTTACGTTCA CTACAATCGT TAGACTACCC TTCATACAAT
ATTGTACTGG TTGATAACGG ATCGAGCGAT AACACACCAA ATCTGGTAAG AAAACAGTTT
CCCAACGTAA AAGTAATAGA AAACCACTAC AACCTCGGTG TAGCGGCGGG GTACAACGTC
GGAATTCACT ATGCACTTGA TAATGGTGCA GAATATATCT TTATCCTCAA CAACGACACA
ACGGTCGATC CTCTTATCAT AACACATCTC GTACAAGCCG CCCACGAACC AAATGCCGGA
ATTCTAATGC CTATCGTTTA CTATTATCAC AATCCACAAC AAGTCTGGTC GGCAGGGGCA
CGTTATCGTG CTTTTCCACC AGCCATTGTA ATGGAGCGTA AAATTTATAA CACATACCAT
GATCTTCAGT TTGCGATTAG TTGTGGTTTC CTAATAACTC GACATGCTCT TGAAAAAGCC
GGTTTGTTTG ATGAAAGCTT TCGCTTTCTC TGGGATGATC TAGATTTTTC ACAACGAGTA
CGCAGAGCTG GACTACGCAT TCTACAAGTT CCACAAGCTA AGATGTGGCA TAAGGTCTCA
CAAACAACAA ACCCTGCTTC TGAGCAATTT TGGCGAACTC ATGGAGAAAG TAGTGTGATT
TTCTTCCGCA GACATAGGCA GTCATTTCCG CTTCCACCAA TATTTTATCT AGGTTACTTT
GCCTTACGCG AATTTATCTT CAAACGTCGT TTGAAATCGT TACCTTCATT CTTACAAGGT
ATACGTAGTG GTCAAACAAA ACAACTAGTA GATGTACCTC TACCCAAGGA TCGGATGTCA
TATCCATAG
 
Protein sequence
MRKPVVILGA GIAGLSISYF LAQRGIPSIV LEKNPYYGGL ARSFRWNDFW CDFAAHRFYA 
HDQEVLDRVR SITPMIEHYR RSRIFFKQRW LRDPIDIIEL FSHLSMHERW HILQDYLRRD
KTLPDHSFEQ YVVKRYGHAL YDIFFRCYTE RLFSLSGHDI AVEWAIWKVR LSSPLDRLKN
STRTKFRRFY YPISGGYGAI VNGLYQKIQE QVILNAQVTS FIRNQNGQVQ GVTYRRGNQE
YELHAQHIIS TLPLTVTAQL LGEEIKISYQ KVDAVYLLLN KPLMSNNHWL YFMDSSSTIN
RLVEFKNMSN HQTPPNTTVV CAEVTIEVPN IVERVVNDLV QSKLIQPHEV IDTRVIREPF
AYPRYTRGYI NEVQRFQQVL QHYPNIHILG RSAQFTHYEV DDLLDQAYQM AQQITQTQPI
TIQSTNKEPP VWIVILTLNN YHDTEECLRS LQSLDYPSYN IVLVDNGSSD NTPNLVRKQF
PNVKVIENHY NLGVAAGYNV GIHYALDNGA EYIFILNNDT TVDPLIITHL VQAAHEPNAG
ILMPIVYYYH NPQQVWSAGA RYRAFPPAIV MERKIYNTYH DLQFAISCGF LITRHALEKA
GLFDESFRFL WDDLDFSQRV RRAGLRILQV PQAKMWHKVS QTTNPASEQF WRTHGESSVI
FFRRHRQSFP LPPIFYLGYF ALREFIFKRR LKSLPSFLQG IRSGQTKQLV DVPLPKDRMS
YP