Gene Cagg_2295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2295 
Symbol 
ID7266708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2798550 
End bp2799305 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID643567125 
Productsugar transporter superfamily protein 
Protein accessionYP_002463610 
Protein GI219849177 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.467555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.780737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTT TTCGGGTAGG CGTTCAACTG CATCCACAAC ATACAACGTG GGAATCGTAC 
CGCAATGCCG TCCGTTATGC CGAAGAGATC GGATGCGACA CCATTTGGAA CTGGGATCAC
TTCTTCCCGC TGTATGGACC ACCGGATGGA GCCCATTTTG AAGGTTGGAC CCTCTTAACG
GCGATGGCGG TGATCACCCA GCGGGCCGAG GTTGGCTGCC TGGTAACGTG CAACAGTTAC
CGTAATCCGG CGCTGCTGTC GAATATGGCA AAGACCGTTG ACCATATCAG TGGTGGACGA
CTAATTCTGG GAATTGGGGC AGGCTGGTTT GAACGTGATT ATACAACGTA TGGTTACGAA
TTCGGCACTG CTGCCGACCG GCTGCGGGCG CTACGGGCGG CATTGCCGAT TATTAAGGAG
CGCTGGGCAA GCGATCAACC ACCACCGCTC CGCCGCATCC CGATCTTGAT CGGCGGCGGT
GGTGAGAAGG TGACGCTCCG CATCACGGCT GAGCATGCCG ATATATGGCA CGGATTTGGG
CCGATCGAGA ACTTTAAGCG AAAGAATGAG ATTCTTAATC AGTGGTGTAT GCAGATCGGG
CGCGATCCGA CGACGATTGA ACGCAGTGTG TCACCCCGCG CCGGTGAGCC GATTGAGCCG
TATCTTGAGG CAGGAGCGAC GCATATCATC ATTGGTATGG GTGAACCGTG GAACTTCGGA
CCGGTTGAGG AGTTGCTCAA ACTACGCGGC GATTAG
 
Protein sequence
MARFRVGVQL HPQHTTWESY RNAVRYAEEI GCDTIWNWDH FFPLYGPPDG AHFEGWTLLT 
AMAVITQRAE VGCLVTCNSY RNPALLSNMA KTVDHISGGR LILGIGAGWF ERDYTTYGYE
FGTAADRLRA LRAALPIIKE RWASDQPPPL RRIPILIGGG GEKVTLRITA EHADIWHGFG
PIENFKRKNE ILNQWCMQIG RDPTTIERSV SPRAGEPIEP YLEAGATHII IGMGEPWNFG
PVEELLKLRG D