Gene Cagg_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2260 
Symbol 
ID7266672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2758895 
End bp2760163 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content60% 
IMG OID643567090 
ProductPolynucleotide adenylyltransferase region 
Protein accessionYP_002463576 
Protein GI219849143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.029615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000423985 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGATCATC TTACCAACCG GCTTGAGCCA CCGTTACAGC ACATCCTCGC CTGCGCCGCC 
GCCTTAGCTG CTACCGTCGA TGCCACTCTT TGGTTAGTTG GTGGTGTCGT GCGTGATCTG
CTGCTCGAAC TACCAATTGG ACGAGACATC GATCTAGCAG TTGAAGGCGA TGTTACTCGT
TTAGCTCCCC TATTGGCCAC GACGTTGGGC GGCACGATCA CCGCCCGCCA TCCGGCGTTT
GGCACTGCCA CCCTTGCCGT TGATCACTGG ATTATTGACT TAGCCCAGAC GCGCACCGAA
TATTATCCGC AACCTGCGGT GTTACCGGTT GTTCAACCGG CACCCCTCAC CACCGATCTC
GCCCGCCGCG ATTTCAGCAT CAACGCAATG GCGATCCGGC TTGTGGCCGA CGATGGCCGG
TTGTTGCCGA TGCCCCTCTT CGATCCGCTC AACGGTGCCG TTGATCTCGC CGCGCGACGG
CTACGTCTTC TCCACGACCG TAGTCTGCGC GATGACCCGA CTCGTATCCT GCGTGGCGTT
CGCTTGGCAG CCCGCCTCAA TCTCACACCC GAACCGGCGA CCGCGGCTCA GATCGAAACT
GCCCTTACCA ACGGCTATCT CGCACTCCTG ACGCCAGAAC GCATCCAAAC GGAATTATGC
CTTACGCTCA GTGAACCCGA CCCGGCAGCA GTCGTGGCCC TGGCCGATCG ATGGCAGGTG
ACCTCGCACA TCATCCCCGG CTTACACTGG TCGTCGGCGC TGGCGGAACG ACTGGCGCGC
TACCGACATG ATGAAGCCGG GATTGCCGGC CTGGCTCCAG CCGAACCGGT GATCGCCGGC
TTATTGCTCT ACGATCTGAG CGAAGACGAT CTCCAAGCTG TCCGACAACG CTACCATCTA
CCTACTCCGT TCCGGCGCTT ATTGATCGAA CTGAGCCGGC TACGTTCGCT TGCCCAAAGC
ATTACCACAA CACTCAGTCC TAGTCAGCTT GACGCGTTGT TGCATAGCTA TAGCACAGCG
ACAATCGCTG TGCTACACTA CGCTGCAACA ACATCGACGG CATCACTAAT CGCACGCTAT
CTGCGCGAAT GGCGTCCGTT GCGCCCACCA CTCACCGGCG ACGATCTGCA AGCCATGGGC
GTTGCACCGG GGCCACAATT AGGCCGCCTG CTGCGTGATC TGCGTGCGGC TACCCTCGAC
GGTACGGTGA CCGACCGTGT CACTGCTGAG CGATGGGTAT ATCAACAACT GGCTGCTGCT
CGCTCTTGA
 
Protein sequence
MDHLTNRLEP PLQHILACAA ALAATVDATL WLVGGVVRDL LLELPIGRDI DLAVEGDVTR 
LAPLLATTLG GTITARHPAF GTATLAVDHW IIDLAQTRTE YYPQPAVLPV VQPAPLTTDL
ARRDFSINAM AIRLVADDGR LLPMPLFDPL NGAVDLAARR LRLLHDRSLR DDPTRILRGV
RLAARLNLTP EPATAAQIET ALTNGYLALL TPERIQTELC LTLSEPDPAA VVALADRWQV
TSHIIPGLHW SSALAERLAR YRHDEAGIAG LAPAEPVIAG LLLYDLSEDD LQAVRQRYHL
PTPFRRLLIE LSRLRSLAQS ITTTLSPSQL DALLHSYSTA TIAVLHYAAT TSTASLIARY
LREWRPLRPP LTGDDLQAMG VAPGPQLGRL LRDLRAATLD GTVTDRVTAE RWVYQQLAAA
RS