Gene Cagg_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2256 
Symbol 
ID7266666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2753238 
End bp2754704 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content60% 
IMG OID643567084 
Productprotein of unknown function DUF404 
Protein accessionYP_002463572 
Protein GI219849139 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000764537 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGACG CCACCATTCC GCTTGTTGGC CAACCGCCAT TTGAACAGTA CACCTTAACC 
GGTGCTTACG ACGAGATGTT TGCGCCAGAC GGCAGCGTGC GCCCAGCCTA CGCCGAGTTA
GCCCGCCGCC TCAGCGCGCT GAGCCGGGAA GAATTGCAGC AGCGGCAACG CTACGCTGAC
CTAACCTTCC TCAATCAGGG GATCACGTTT ACGGTCTATG GCAACGAATC CGGCACCGAA
CGGGTCTTCC CCTACGACCT GTTGCCCCGC ATCATCACCG CTGACGAATG GCAGCAGATT
GAGCGCGGTT TAAGCCAGCG CATTATCGCG CTCAATCACT TCTTGCGCGA CATTTACCAC
GATCAGCAAA TTCTGCGCGA TGGCGTCATT CCCCGCGAGC TGGTCTACAG TTGCCGCCAT
TACCGGCGCG AGATGCGCGG CTTGCCCGTG CCGCGCAATG TGTATACCGC GATTGTGGGC
ACCGATCTGG TGCGTTTGCC CGATGGTCAG TTTGTGGTGC TCGAAGATAA TCTGCGCGTG
CCGAGCGGCG TCAGCTATAT GCTGACCAAC CGGGCAGTGA TGAAACGCGC CTTTCCACAT
CTGTTCGGCG CCCACGGGGT ACGCCCGATC GACCATTACG GGCAGGCGTT GCTCGCCACC
TTGCGCGCCT TGGCCCCCGA CCACCGGCCT GAACCAACGA TTGCTTTGCT CACCCCCGGC
GTCTTTAATT CAGCCTACTT TGAACACACC TTCCTTGCCC GCCAGATGGG GATCGAGCTG
GTCGAAGGGC GCGACCTGAT CGCCCACGAT AATGTGGTCT ATATGCGCAC CACCGGCGGC
TTACGGCGGG TTGACGTGAT CTACCGCCGG ATCGACGACG ATTTTCTCGA CCCGATGGTC
TTCCGGCCTG ACTCGATGCT CGGCGTGCCC GGCTTGCTCA ACGCTTACCG CGCCGGCAAC
GTCGTGCTGG CTAACGCGAT TGGCACCGGC GTCGCTGATG ATAAGGCAAT CTATGCCTAT
GTGCCGGCGA TCATTCGCTA TTACCTCGGC GAGGAACCGA TCTTGCCCAA TGTGCCGACC
TATCTATGCA ACTGGTCAGA CGAACGAGCG TATGTGCTCG AACACTTGGA TGAATTGGTC
GTCAAGGCAG TCGGTGAATC GGGCGGCTAC GATATGCTGA TCGGCCCACA CAGCACGCGC
GAGCAACAAG CCCAATTCGC CGAACGCATC CGCGCCAACC CGCGCAACTA TATCGCGCAG
CCGACCTTGC AACTCTCGTG CGCGCCGTGT TTTATCGATG GCGTCATCGA ACCGCGCCAC
GTCGATCTGC GCCCGTTCAT CCTCTTTGAC GGCGAGGCCA CCACGATTGT GCCCGGCGGG
TTGACCCGCG TCGCCCTCCG GCGTGGCTCG CTGGTGGTCA ATTCATCGCA AGGCGGCGGC
AGTAAGGATA CGTGGGTGTT GTATTGA
 
Protein sequence
MPDATIPLVG QPPFEQYTLT GAYDEMFAPD GSVRPAYAEL ARRLSALSRE ELQQRQRYAD 
LTFLNQGITF TVYGNESGTE RVFPYDLLPR IITADEWQQI ERGLSQRIIA LNHFLRDIYH
DQQILRDGVI PRELVYSCRH YRREMRGLPV PRNVYTAIVG TDLVRLPDGQ FVVLEDNLRV
PSGVSYMLTN RAVMKRAFPH LFGAHGVRPI DHYGQALLAT LRALAPDHRP EPTIALLTPG
VFNSAYFEHT FLARQMGIEL VEGRDLIAHD NVVYMRTTGG LRRVDVIYRR IDDDFLDPMV
FRPDSMLGVP GLLNAYRAGN VVLANAIGTG VADDKAIYAY VPAIIRYYLG EEPILPNVPT
YLCNWSDERA YVLEHLDELV VKAVGESGGY DMLIGPHSTR EQQAQFAERI RANPRNYIAQ
PTLQLSCAPC FIDGVIEPRH VDLRPFILFD GEATTIVPGG LTRVALRRGS LVVNSSQGGG
SKDTWVLY