Gene Cagg_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2216 
Symbol 
ID7266789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2714839 
End bp2716266 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content55% 
IMG OID643567047 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_002463535 
Protein GI219849102 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.263831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC GCGAGGATGC GATCGCATAT ATTGCCAAAC TCGAACGCGA ATTGCAGGCA 
GCCCAAAGTC GAATCGCCGC TCTCGAACGC GAAGCTGCAT TATATTTACA ACACAACCGT
GATCTGAATC GACGACTGGC AGCGCTGTTG TCGGTATCGG CTGCGCTCTT AATCGCCCAC
GATATTGATA CGGTTGTCAC GATCGTCGTG CAACGGGCCA TAGAGTTATT TCCGGGAACA
GCGACGGCTT ATATCTATTT GTTCGAGCAC GAACCGGAAG AGCGGCTGCA ACTACGGGCC
TCGGCACCCG AACATACCAC ACCGCTTTTC TGTTCGATCT TGGCCGGGAT AGGGGCTAAG
GCCCCACGAG CTTTACTCAT CAACGGGCCG GAGTTGGAGT ATCTCTTGCA TCAGCAGCAA
CCTGAGGCGA CGTTGGTACG TGACAGTCGT CAATGGCCGC AGAGCGTCTT GTTAGCCCCG
TTGCGAATTG AACGGCAACG GATGGGAGTG CTGATCGTCT GCAGCGAGCA ACTCTCGCAT
CTGTATCACC CGCGTGATCT GCCATTTGTA CAGGCACTCG CCGATCTGAC CGTCATTGCG
ATCGATGAAA TCCATCAGCG TCAGCGTGCT ACCGCGTTGC AGCACGATTT AGCCCTCACC
CAATCGCTGC GCGCCGAAGC TGAAGCTCGC CTTAATGCAG CTCAAGCACA ACTGCTGCAA
AGTGCCAAGC TGGCTGCGGT CGGTGAATTG TCAGCTTCAG TGGCCCACGA GATCAACAAT
CCCCTCTACG CTGCCCGTAA TAGCCTGTAT CTGGTTGAAC AAGATTTGCC CCCCGACGCA
CCACAACGTA CCTTTCTGAC GATTGCGCAA CAAGAGCTGA GCCGGATCGC ACGCATCATT
ACTCGCATGC GCGATTTCTA CCGTCCTTCA CGCGGTGAAC TCACTAATGC CAACATCAAT
GCGCTGCTGC GCGAGACGCT CGAATTAGTG ACAACCCATC TACGCCATAG CCACGTCACG
GTACATACCC AACTAGCGCC CGATCTACCG CCGATCGTGG CCCATGCCGA TCAGTTGCGT
CAAGTGTTTT TGAACATTAT TCTGAACGCC TGTGATGCAA TGCCCGGTGG TGGCGAACTC
ACCGTGCGTA GCGAATTGAT CGCTAGCCGA CCTGAGGAGC CAATGACGCT GGCTGTCTCG
ATTAGCGATA CGGGCGTCGG GATCGATCCT GAGCATATTC CCCATCTCTT CGAGCCATTT
TACACCACCA AACCTCACGG TACCGGCCTT GGTCTTGCGA TTAGCGCACA TATCATTACA
CAGCACGGCG GACGAATCCT CGTTGACAGT CAACCCGGCG TTGGTACGAC CTTTACAATT
TTGCTGCCAC TGGAACCGCC ACCAACGGCA GTCGCTCAGG GGCAGTAA
 
Protein sequence
MIEREDAIAY IAKLERELQA AQSRIAALER EAALYLQHNR DLNRRLAALL SVSAALLIAH 
DIDTVVTIVV QRAIELFPGT ATAYIYLFEH EPEERLQLRA SAPEHTTPLF CSILAGIGAK
APRALLINGP ELEYLLHQQQ PEATLVRDSR QWPQSVLLAP LRIERQRMGV LIVCSEQLSH
LYHPRDLPFV QALADLTVIA IDEIHQRQRA TALQHDLALT QSLRAEAEAR LNAAQAQLLQ
SAKLAAVGEL SASVAHEINN PLYAARNSLY LVEQDLPPDA PQRTFLTIAQ QELSRIARII
TRMRDFYRPS RGELTNANIN ALLRETLELV TTHLRHSHVT VHTQLAPDLP PIVAHADQLR
QVFLNIILNA CDAMPGGGEL TVRSELIASR PEEPMTLAVS ISDTGVGIDP EHIPHLFEPF
YTTKPHGTGL GLAISAHIIT QHGGRILVDS QPGVGTTFTI LLPLEPPPTA VAQGQ