Gene Cagg_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2194 
Symbol 
ID7266767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2689024 
End bp2689914 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID643567025 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002463513 
Protein GI219849080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.982521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGA CGAATGATCT TGAACGTGTG ATGACGCCGG TGGCTACGCG ACGACGATCA 
CAACCACTTT CGCTGCTGTT GTGGCGTATC GCCGGATATG GCGCGCTGGT TATAGCTGTG
GTTACGATCG GTCTACCGGT CTACTGGACG GTGATGGCCG CGTTTAAAAC GAGCCGTGAG
ATTTATTCGT TGCCGGTGAC ATGGTGGCCG GCTAATCCGA CACTGAACAA TTTTCCGGCG
GCGTGGGAGT CAGCGCCATT TGCTCGCTAC TACCTCAATA GCTTTATTAC GACCTTCTTT
GGATCGGCTG CCGAGGTGAT TTTGGCTATC TTTTCGGCTT ACGCTTTGGC ATATCTGCGC
TTCCCCCGCA AAGATTTGGT TTTTCTCTTG TTGTTGGCGG CATTGATGAT ACCGGTCGAA
ATCACGATTG TGCCGAATTA TCTGACCGTG GCTCGCCTTG GTTGGATCAA TACCTATCAA
GGCATTATCG TGCCGGGTGC AGCAATTGCC TATGGTACCT TCTTGCTCCG GCAGGCGTTT
TTGGCCGTGC CAAACGAGAT TCTCGAAGCG GCGAAGGTTG ATGGAGCCGG TCACTTCCGC
ATTCTGACCG GTATTGTTGT GCCAATCGCT CAGCCGGCAA TTGTGACGAT GGCGTTGTTG
TCGGTGGTCA GTAAGTGGAA CGATTTTCTC TGGCCGTTGA TCGTCACCAA TACCACCGAT
ATGCGCACGT TGCCGATAGG TGTTTTCTGG CTGCGGAACA GTGAGGGTTT AGCCAATTGG
GGCGTAGTAA TGGCCGGTTC GTTGTTCCTG ATCGTGCCGG TGTTGATCGG GTTCTTGCTG
GCGCAGCGCG CCATTGTCGA GGGGATGACC GCCGGTGCGG TGAAAGGCTA G
 
Protein sequence
MAVTNDLERV MTPVATRRRS QPLSLLLWRI AGYGALVIAV VTIGLPVYWT VMAAFKTSRE 
IYSLPVTWWP ANPTLNNFPA AWESAPFARY YLNSFITTFF GSAAEVILAI FSAYALAYLR
FPRKDLVFLL LLAALMIPVE ITIVPNYLTV ARLGWINTYQ GIIVPGAAIA YGTFLLRQAF
LAVPNEILEA AKVDGAGHFR ILTGIVVPIA QPAIVTMALL SVVSKWNDFL WPLIVTNTTD
MRTLPIGVFW LRNSEGLANW GVVMAGSLFL IVPVLIGFLL AQRAIVEGMT AGAVKG