Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2150 |
Symbol | |
ID | 7267658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2640629 |
End bp | 2641642 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643566982 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002463470 |
Protein GI | 219849037 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000169098 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCGATC TGCAAACCCT ATCCGGCGCA CGAGTCTTGA TTACCGGTGG GCTTGGCTTT ATTGGCTCCA ATCTGGCGCA CAGGCTGGTT GAACTTGGTG CACAGGTCAC TCTCGTCGAC TCGTTGATCC CTGAATACGG TGGTAATCTC TACAACATTG CCGGTATCGA AGATCGAGTG CGCGTCAATA TTGCCGACGT GCGCGATGAG TATTCCATGA ACTATCTGGT ACAAGGGCAC GATATCCTGT TTAACCTCGC CGGACAGACC AGCCATCTCG ACTCGATGCG TAACCCCTAC ACCGACCTCG ATATTAACTG TCGTGCCCAA TTATCAATCC TCGAAGCCTG TCGTAAGCAC AATCCGCGAA TCACGGTAGT CTACGCTTCA ACCCGCCAAA TTTATGGCAA GCCCGATTAT CTGCCGGTCG ATGAACGCCA TCTGTTGCAT CCGGTTGATG TCAACGGTAT CAACAAAATG GCCGGTGAAT GGTACCACAT TCTCTACAAC AATGTGTACG GCATTCGGGC ATGTGCTTTA CGCCTAACGA ACACCTACGG CCCACGCATG CGGGTGAAGG ACGCGCGCCA AACCTTTCTC GGCGTCTGGA TCAGAAATGT GATCGAGGGC AAACCGATCC AAGTGTGGGG TGACGGCAAA CAACTGCGTG ACTTCACCTA TATCGACGAT TGTGTGGATG CACTGTTGTT AGCAGCTCTG CATCCGGCTG CAACCGGACA AATTTTTAAT CTGGGCGGTT TAGAGGTGAT TAATCTGCGT GATCTGGCAG CCTTAACGGT AGAAGTGGCC GGTGGCGGCA GTTTCGAGAT TATTCCCTAC CCACCCGACC GTAAGCCGAT CGACATTGGT GATTACTACG CCGATGATCG TCGTATTCGG CAGATGTTGG GCTGGCAACC ACGTATCGAT CTCCGTACCG GCTTAGCCCG CACGATTGCC TTCTACCGCG AACATCACCA ACACTATTGG GATTCGGTCG TGGAAGGAGT TTAA
|
Protein sequence | MIDLQTLSGA RVLITGGLGF IGSNLAHRLV ELGAQVTLVD SLIPEYGGNL YNIAGIEDRV RVNIADVRDE YSMNYLVQGH DILFNLAGQT SHLDSMRNPY TDLDINCRAQ LSILEACRKH NPRITVVYAS TRQIYGKPDY LPVDERHLLH PVDVNGINKM AGEWYHILYN NVYGIRACAL RLTNTYGPRM RVKDARQTFL GVWIRNVIEG KPIQVWGDGK QLRDFTYIDD CVDALLLAAL HPAATGQIFN LGGLEVINLR DLAALTVEVA GGGSFEIIPY PPDRKPIDIG DYYADDRRIR QMLGWQPRID LRTGLARTIA FYREHHQHYW DSVVEGV
|
| |