Gene Cagg_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2149 
Symbol 
ID7267657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2639596 
End bp2640546 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID643566981 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002463469 
Protein GI219849036 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.556452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000650625 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATAC TCATCACCGG GGGAGCAGGT TTTCTCGGTT CACACTTGTG TGACCGCTTT 
CTGGCAGAAG GGCATACAGT GATTGCGATG GACAATCTCA TTACCGGTAG CACCGACAAT
ATTGCCCATC TGGCCGGACA CCCCCGCTTT CTCTTTATCC ACCACGATGT GACCAACTAT
ATCTATATTG AAGGTCCCAT CGATGCAGTA CTCCACTTTG CCTCACCGGC GTCACCGATT
GATTATCTCG AACTGCCGAT CCAAACCCTT AAAGTCGGTG CGCTCGGCAC GCACAAGGCG
CTCGGCTTAG CCCGGGCTAA AGGAGCACGT TTCCTCCTTG CTTCCACGTC AGAGGTCTAC
GGTGATCCGC AAGTCCACCC CCAACCGGAA AGCTACTACG GACATGTCAA CCCGGTTGGA
CCTCGCGGGG TCTACGATGA AGCAAAGCGA TTCGCCGAGG CGATGACGAT GGCCTACCAT
ACCTATCACG GGGTCGAAAC GCGAATTGTT CGCATCTTCA ACACCTATGG CCCACGTATG
CGTCTCCGCG ATGGTCGCGT CGTTCCCAAC TTTATCTCAC AGGCACTGCG CGGTGAGCCG
TTGACTATCT ATGGTGATGG TAGTCAGACC CGTTCGTTCC AATATGTGTC AGATTTGGTT
GAAGGTGTCT ATCGGCTACT ATTCAGCGAT GAAGTCGAAC CGGTCAACAT TGGTAATCCG
GGCGAATTTA CTATTGCCGA ATTTGCCCAG ATCGTCAACG AAATTACCGG CAATAAAGCC
GGGGTGATCT ACCGCGATCT GCGCACCAAA GACGATCCAC AGGTGCGCCA ACCTGACATC
AGCAAGGCGC GCCGGATTTT GCAATGGGAA CCGAAGGTAT CGCTGCGCGA AGGTCTCGAA
CTGACGATCC CGTGGTTCCG CCAAGAGTTG CAGCGACGCG GCGAATTGTA A
 
Protein sequence
MRILITGGAG FLGSHLCDRF LAEGHTVIAM DNLITGSTDN IAHLAGHPRF LFIHHDVTNY 
IYIEGPIDAV LHFASPASPI DYLELPIQTL KVGALGTHKA LGLARAKGAR FLLASTSEVY
GDPQVHPQPE SYYGHVNPVG PRGVYDEAKR FAEAMTMAYH TYHGVETRIV RIFNTYGPRM
RLRDGRVVPN FISQALRGEP LTIYGDGSQT RSFQYVSDLV EGVYRLLFSD EVEPVNIGNP
GEFTIAEFAQ IVNEITGNKA GVIYRDLRTK DDPQVRQPDI SKARRILQWE PKVSLREGLE
LTIPWFRQEL QRRGEL