Gene Cagg_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2141 
Symbol 
ID7267649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2632922 
End bp2633560 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID643566973 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_002463461 
Protein GI219849028 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000520042 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCCGT TGCTTGCCCG CTTCCGCCAA GTCTACGAGC AGGTTTCGTT GCCGCTTGGG 
CATTTCTGTA CCCGGCTTGG GATCCATCCT AATATGCTTA CCTATCTGAG CCTCGTGTTT
AGTGTGTTAG CCGGTTATTT GCTCGCACAA CGCGCCTTCC TCGGGGGCGT GGTCACCATC
TTGCTGATGG GGTTAGCAGA TGTACTTGAT GGCGCTACCG CACGAGCTAG TGGTAAAGCG
AGCGACTATG GGACGGTGCT CGACCACGTC ACCGACCGCT ACGCTGAGGC GTTTGTGATG
GGGGGCTTGA TGATATCCGG TGTGGTTTCT CCGGTATGGA CGTTGTTTGC GATCTTTGGT
ATGGTGATGG CAAGCTACGT TCGTGCCCGC GCAGAAGCAA CCGGTAAATT GGCTTCGTGC
AATGTTGGCT TCGCGGGTCG GCAAGAAAAG CTGGGCCTGC TCTTGATCGG TTTGGTGTTA
ATGCCCCTCT TGCCTGATTT ACCGATCCTT GAGTGGGCCG TGATTGCAGT AGGTGTCGCC
TCCCACGTGA CCGCTGTGCA GCGGTTGTTG TATACGCGCC AAATGCTGGT TGGTTCGGCA
CACGATCGTA AACTGCACAA GGAATCAGGG ATCGTGTAA
 
Protein sequence
MMPLLARFRQ VYEQVSLPLG HFCTRLGIHP NMLTYLSLVF SVLAGYLLAQ RAFLGGVVTI 
LLMGLADVLD GATARASGKA SDYGTVLDHV TDRYAEAFVM GGLMISGVVS PVWTLFAIFG
MVMASYVRAR AEATGKLASC NVGFAGRQEK LGLLLIGLVL MPLLPDLPIL EWAVIAVGVA
SHVTAVQRLL YTRQMLVGSA HDRKLHKESG IV