Gene Cagg_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2130 
Symbol 
ID7267638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2622622 
End bp2623413 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content58% 
IMG OID643566962 
Producthypothetical protein 
Protein accessionYP_002463450 
Protein GI219849017 
COG category[S] Function unknown 
COG ID[COG4328] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000306973 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACATTG ATACCACCTT GCCAACCGTC TATCTCGGTC TAGATTTGGC GTGGTCGTCA 
CGTAACCCCA GTGGGTTCGC GGCTTGTGTT GGTACGCCGG CCGGGGCACA GCTCGTACAA
CCGCCAAACC GCCTGCTGAC GAACGATGCC ATCGTACAGA CGATTCGTAC AGTGATCGGA
GATGCACCGG CCATTCTTGC AATTGATGCA CCGTTGGTCG TGCCCAATGA AACCGGGCGA
CGCACCGCCG AGGCCGAGTT AGCTGCGGCC TTCCGGCGTT ATGATGCCGG TCCACACCCG
GCCAACCGCC GTCTACTCGC ACGCTACGGA GGGGTGCGCG GTGAAGCACT GCTGGCAGCG
CTGGCGGTGG ATGGATTTGT CTACACAGCG TCCATTGAAG CCGGTATGAG CGGGAGGTTT
ATCATTGAAG TCTTCCCACA CCCGGCAACC GTGGTCTTAT TCCGCTTACC GCATATCTTG
CGCTATAAAG CGCGGCCAGG CCGTGCGTTA GCCGAACGTC GGCGCGAATT AGGGCGTTAC
CTGAGTTTGT TGCGCGGATT ATCCGGCGGC GATCCACCTT TGTTTGGGAG TGATGAACTA
TGGCATGACA TTGACCTCGA TCAACTCAGC CCACGTTCGT TAAAGGCCGT CGAAGACGAA
GCTGACGCTC TGCTCTGTGC ATATATTGCC CTCTACGGTC ATCGCTGGGG GGCAACACGC
TGTCGAAGCT ATGGTACGTT GGAGGGAGGA GCCATCTTTA CGCCGGATTG GAGTACGTCC
GACGAGTACT AG
 
Protein sequence
MNIDTTLPTV YLGLDLAWSS RNPSGFAACV GTPAGAQLVQ PPNRLLTNDA IVQTIRTVIG 
DAPAILAIDA PLVVPNETGR RTAEAELAAA FRRYDAGPHP ANRRLLARYG GVRGEALLAA
LAVDGFVYTA SIEAGMSGRF IIEVFPHPAT VVLFRLPHIL RYKARPGRAL AERRRELGRY
LSLLRGLSGG DPPLFGSDEL WHDIDLDQLS PRSLKAVEDE ADALLCAYIA LYGHRWGATR
CRSYGTLEGG AIFTPDWSTS DEY