Gene Cagg_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2110 
Symbol 
ID7267617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2593087 
End bp2594823 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content55% 
IMG OID643566943 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_002463432 
Protein GI219848999 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.162795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA AAGAAGATAT TGTCATCCGT GTCGCCGGCG AAAGTGGCGA CGGTAGCAGT 
GCGACCGGTG AGATGCTGGC CCAAGCGGCT GCCCGTTCGG GACTCCATGT CTTCACATTC
CGCACCACAC CGGCTGAAAT CAAAGGGGGA CCGGTAATGT TTCAGGTGCG TGCCTCGAAC
AGTCCCGTGC GCTCGATGGG TGATGCTGTT GATATTCTCT TCGCGTTTAA CCGTGAGGCA
TGGGATCTGC ATCATGCCGA TCTAGCCCCC AACGCTGTTC TCCTCTACGA TCCCGAAGAT
TTTTCCTTAC CGAGTGAGTT TACCGGCGTC GCGTATCCGG TACCCATCGG AAAGATTGCC
CAAGAGACCG GGAATCGGCG TGGCAAAAAT GTTGTAGCAC TTGGGGTTGT GGCGGCTTTG
TTCGGTTTAG GGTTAACGAA GTTGGAAGAT ATTGTACGAG CGAAATTGGG CAAGAAGGTC
GATCTGCTTG AAACAAATCT CGCAGCCCTC CGCGCCGGTA TTGAATATGC ACATCAACTT
GAGAAGCGCG ATTCGTTTTG GATGGAAGCG ACGGCCGAAC ACGAGTGTTA TGCGATGACC
GGCAATCAGG CAATTATCGC CGGTGCTCTC CACGCCGGGG TTGAGTTCTT TGCCGGCTAT
CCGATCACGC CCGCTTCGGA CATTATGGAA GGTATGGCCG CGATCCTTCC CCAAATTGGT
GGCGGTTATC TCCAGGCCGA AGATGAAATC GCTGCGATTA TGGCCTGTAT CGGGGCATCG
TATGGAGGTA AGCGAGCCAT GACTGCGACC TCGGGGCCTG GGTTGTCGCT GATGAGCGAG
GCGATAGGCT ATGCCAGTAT GACCGAAATT CCCGTCGTCA TTGTTGATGC TCAACGCGGT
GGGCCGAGTA CCGGTTTGCC CACCAAAATG GAGCAGTCAG ACTTGAACAT TGCCCTACAC
GGTGGTCACG GTGATAGTCC GCGCATTGTG CTGGCGCCGG CGAGTGTTGC CGAGTGTTTT
CATCTGACGG TATGGGCCTT TAATCTGGCC GAGCAGTATC AGTCACCGGT AATTGTGTTG
AGCGACTATT CACTCTCGTT CCGCACCGAA ACGGTTGAGC CGTTCGATCT GAGTAAATAC
CCGCGCATTA ACCGTCTGCG TCCCAACAGG GCGTTAGCTC CCAAGCAGTA CCGTCGCTAT
GAGTTGACGG CGAATCTCAT CTCGCCGATG GTTACTCCTG GCGTTGCCTA TGCGCAATAC
ACAGCTACCG GTCTTGAGCA TAACGAATTT GGTAATCCCG ATTACACACC GCTCAATCAC
ATGCGGATGA CCGAGAAGCG ATGGGGTAAG TTGGCGCCGT TGCTGCATTC GCGAGAGTAT
GTTCGTCGCT TTGGTGCCGA ACGGGCAAAG GTGGGCATCA TTTGTTGGGG AACAACCGCC
GGTCCGTGTC GAGGGGCAGT CTATCTGGCC GGCCAAGAGG ATGTACCGGT GGCGATGTTA
CAGGTGCAGA TGCTCTCGCC GCTGCCTGTT GATGCCATTC GCGAGTTTCT CGATCAGGTT
GAGATCGTAC TGGTGCCGGA GGTCAATTTC CAGGGTCAGT TTGCGAAGCT GTTGCAAGCC
GAACTGGGTA TTACGGTGTA TTCGATGACG AAGTACGCCG GTATGCCCTT CTCACGACTC
GAGATTCTTC GCCAAATTCA CGCACTTGCC GGGTTGACCG AGCCGACTTT GGCATAG
 
Protein sequence
MIVKEDIVIR VAGESGDGSS ATGEMLAQAA ARSGLHVFTF RTTPAEIKGG PVMFQVRASN 
SPVRSMGDAV DILFAFNREA WDLHHADLAP NAVLLYDPED FSLPSEFTGV AYPVPIGKIA
QETGNRRGKN VVALGVVAAL FGLGLTKLED IVRAKLGKKV DLLETNLAAL RAGIEYAHQL
EKRDSFWMEA TAEHECYAMT GNQAIIAGAL HAGVEFFAGY PITPASDIME GMAAILPQIG
GGYLQAEDEI AAIMACIGAS YGGKRAMTAT SGPGLSLMSE AIGYASMTEI PVVIVDAQRG
GPSTGLPTKM EQSDLNIALH GGHGDSPRIV LAPASVAECF HLTVWAFNLA EQYQSPVIVL
SDYSLSFRTE TVEPFDLSKY PRINRLRPNR ALAPKQYRRY ELTANLISPM VTPGVAYAQY
TATGLEHNEF GNPDYTPLNH MRMTEKRWGK LAPLLHSREY VRRFGAERAK VGIICWGTTA
GPCRGAVYLA GQEDVPVAML QVQMLSPLPV DAIREFLDQV EIVLVPEVNF QGQFAKLLQA
ELGITVYSMT KYAGMPFSRL EILRQIHALA GLTEPTLA