| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2107 |
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| Symbol | |
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| ID | 7267614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 2584301 |
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| End bp | 2591779 |
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| Gene Length | 7479 bp |
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| Protein Length | 2492 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643566940 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002463429 |
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| Protein GI | 219848996 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5427] Uncharacterized membrane protein |
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| TIGRFAM ID | [TIGR03662] Chlor_Arch_YYY domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACAGG CTCTCAATCG CTCCGCTGTA TGGGTCGTCC GCCTTGGGCT GGCGGCCATT
TTACTGTTGG CACTCTACTT CCGTACTCTC AACCTTTTTG ATTGGGATAG CGGTACCGGT
CAGCATCCTG ACGAGCGCTT TTTTACCTAC GTTGCCTCGA CCGTCCGTCT GCCGAGTGAT
CTCGGTGAAT TCTACGACTC AAGCCGTTCA CCGCTTAACC CACGTAATTA CGAACAATTT
CCGCTCTATG TCTATGGGCC GCTGCCGATT ATGCTGACGC GGGTAGTTGC TGTCATGCTG
ACGCCTGCCG AGGTGTTGCC GGCCCAGGTA CCCTCCATTG AAGGTCCGCC ACGACTTGGC
GCCGATCCGA CAGCGCCACA AGAACGGCGA ACCGATTACG GGCCGCCGGT GGCAAACCCT
GAACGGAACT GGCCGCGCTT CCTGCCGCTA CTCTGGTGGC TTAATCCTGA TGGCGTCAAT
TTAACCACCT ATAGTGAGAT TGTAAAGATC GGCCGTGCCT TAGCCGTCGT GTTTGATCTC
GGTAGTGTGG TGCTCGTCTA CTTGATCGGC AGACGGCTGT TTGGTCGGCG CATCGGTTTG
CTCGCCGCCC TGTTGACGGC GCTGACGGTC ATGCATATTC AGCAGAGCCA CTTTTTCGTT
GATCCGGCTT TTTCGACGTT TTTCTGCTTA CTGGCGCTGT ATTGGACGGT ACGTGCGGCA
CAGGGTGGCG GTGTCGGTGT GTATGTCGCG TTGGGGATGA GTATCGGCGC GGCAACGGCG
AACCGGATAA CCATGGCGAC GATCGGTGGT TTGGCGATTG TCGCAGCGTT CATCGCGGCA
CAGCGTGCGT TGCGGGGGCA ACGTTGGCAC GCGCTGTTTG ATCGTTTCTG GCAACGTGAG
ATGTGGTTGC TCGTCGTTGC CGGGATTGCT ACAGTACTAA CGTTTCGAGG CTTAGCGCCT
GATGCGTTTA TCGGTTCACG ACCCGATTCA CCGCTTATCG ATAGCCCATC GATCTTGGAT
GGTGCCGGAT TTTTTGATAT TCGACTTGAT CCACGCTTTC GCGAAAATCT GATCACAGTG
CGCGCATTGG TAACCGGCGA GTATGATTTC CCCCCCGGGC AGCAGTGGGT AGGACGGCCA
GCTTACCTGT TCCCGTGGCA AAATATGGTG CTTTGGGGAA TGGGTCTGCC GTTGGGATTA
GCGGCGTGGG GGGGCTGGTT GCTCTTTGCC GGGCGTTATG TTCGGCGCGG CGGGTGGCAG
TGGGCCGTGC ATCCATCGGC ACAGATCGGG CGTCCGTGGC ATCCGGCATG GGTGCTATGG
GTGTGGGTTG CCTTCTACTT CGGTTGGCAG GGTAGCCAGT TTGCCATCAC GATGCGCTAT
CTATTACCGA TCTACGGTGC GCTGACCGTG CTGGGGGCGT GGGCGCTGGT CGTGCTAGGG
CGCTGGGGGC GTCGGCGCGC GACGAAAGCC GTAGCGTCGT TACGTTCGTG GGCAGTGGTT
GCCGGCCGTG GGTTAGCTTG GGCAGCGCGC TGGGCTTTGC CGGTGGTATT GATTGCGACT
GCGCTTTGGG CTTATGCCTT CTCCCGTATC TATACGGTGC CTCATTCGCG GGTACAAGCG
GCTCGTTGGT TGGCCGAACA CGCCCCGCCC GGAAGTTTTG TGATCTCGGA ACGTTGGGAT
GATCCGCTGC CGCTCCAAGC TACCGCCAAT GCGGCGTGGG GGATTACCTT CTTTGGAATC
GACTCATCAC CGTATGCCGA AGACGAACCG GCTAAGTATG TCGGTCAAGG CGGTGAGCCT
GGTTTGCTCG ATCAACTCGA CCGTGCCGAT TATATCACCC TCACGAGTAA CCGGGTTTAC
GATAGCACGT CGCGCTTGCG TATGCGCTAC CCGGCGCTCA TGCGGTATTA CCATAGCCTG
TTTACCGGTG AACTCGGCTT TGAATTAGTC GCAGAAATCA CCTCCTACCC GACCGTGCTC
GGGATTCGGT TGCCCGACTG GATGGCCGAA GAGGCGTTCA CCGTCTACGA TCATCCCCGT
GTGTTGATCT TTCGCAAAAC ACCGCTCTAT AGCCGCGAGC GAGCCGAGCA ATTGATTACG
GCTGAGGTTG AGTGGGGGGA AGTCTATAAA TCACCGCTCC AGATTGCCGA TCGCAATCCG
ACGGCGCTGC GCTTGACCGA TAGTGTTTGG CCACGTTATG CAGCCGGTGG CGATTGGTGG
TCTTGGCTGG GTACCAATCC GTTTGCGCCA TTGCTCTGGG TGTTCTGGAT CGAGGCGCTT
GGTTTGGCCG TTTTCGCCCT GATCGGACCA CACCTACACC GGTTACCCGA TCGCGGCTTC
ACCCTTGCTA AGATTAGTGG CTTGCTCCTG GTTGCGTATC TGGCATGGCT GGCCGGCAGC
TTGCAGCTTG CGCCCTTTGC CCCTGTTACC TTGTGGACGA TAGGTATAGG GTTGTTGGGG
ATAGGTGCAG TTGTCGGTTG GCGCGCACGT TACACCTTGC GTCGTATTTG GCAAGAGCGT
TTGCCGGCGC TGCTGATAGC CGAGACGCTC TTCATCGGCT TTCTGCTGCT CGGCGTGACG
TTGCGTTGGT TCAACCCCGA TCTGTGGCAT CCGGCCCGTG GTGGGGAAAA GCCGATGGAT
TTCGCTTATC TGAACGCCGT CTTGCGCAGT GCGGCGTTTC CTCCTCTCGA CCCGTGGCAC
GCTGGTGGCT ACATTAATTA TTACTATTTT GGGTTTGTGC TCGTTGGGGC CTTGATCCAT
CTCAGCGGGG TCGCCCCGGC AGTTGGCTAT AATCTCGCTG TAGCCACAAT CTTTGCCCTA
ACCGCATTCG GTGCATTTGG CGTCGTCTAT AATCTCCTCG CTCCGCGTCT CCCGCAACTC
CGGCGTGAAC GTACTGCCGT AGTGGCCGGT GTGCTTGCAC CGGGATTGAT GTTGTTGCTC
GGTAATCTGG CCCAAGCCGG TTGGTTCCTG AGTGGGTATG CTGCCAAACA GGCAGCGAAG
GGTCGGCTGG AGTGGGCTTT CTGGGATGCG ACACGCATTA CTCCGGGGAC AATTAACGAG
TTTCCGTTTT TTACCTTCCT CTTTGCCGAT CTGCACGCAC ATATGATCGT GATGCCACTC
AGCCTGGCTG CGTTAGGCTT GGGGCTGGCG TGGGTGCGTA CAGGTGGAGC CACTCATTGG
TGGTTGATAG GGTGGTTGGG TTTGGTTGCC GGTGCGATCC GTGCCACCAA TACGTGGGAT
TACCCGACGT TTGTTGGGGT GGCCGGTTTG TTGTTGGCGG TGGCGACCGC ACGCCACCAA
CGGCGTGCCG GTTGGGGATG GCCGGCGACG GTCTTAGTCG CACTAGGAGT TGGTGTAGCA
CCGGCACTCA TCGGGAATCT ACTCTTTGCT CCATTTATTG CCAACTTTGC GACCGACTCG
AGTGGGATCG AGGTGTGGCG TGGCGCGGGT GCTACCTTAC TAGCGGCAAT CCTCGCTGCC
GAACGAACGA CAACGAGTCA GCTTGTACAG ATCGGCGGTC ATTGGTTGGC GATCTGGTTG
ATCGTGATCG GGTTGTGGAC GTGGCGGCGC GGAATCTCCT TACTAATCGT AGCAAGCTTG
TTGGCGGTTT TCTTGATCGC ACTAGTGTTT AACGTACCGG CCATTGTTCC GTTGGTTGGC
CTACTGGTCG TATCTATCTG GTTACTCTGG CGGATGCGGC AGTGGCCTTT CACCGTTCTG
ATACCTGCAC TGTGGGCACT CGGCGGGATC GGGTTATGGG TGTTGGTTGA GGTCGTCGTG
GTACGCGGCG ATGTGGGCCG GATGAATACC GTCTTCAAAT TCGGTCTCCA TGCATGGATG
CTATTAGCAT TAGCTACCGC AGCGGCAATG CCATGGTTGT GGGCGGCGAC AGCACGGTTG
GCGCATCAAT GGTGTTGGTC ATTGCGTGCT GGGGTGGGTC TGCTGCTAGC TGCCGGGTTG
GTCTACCCGC TTACTGCTAC CCCTGCTCGT CTTGCCGATC GCTGGGATCG CGACGCGCCG
CATACCCTCG ACGGTATGGC TTTTTTTGCC AATATCACCG CTGCACGTAA CGGTCCGGCG
TACTCACTCG ATGAAGATGC TGCCGTCATT GATTGGCTCC GGCGCAACGC GCGTGGAACG
CCGATTATCC TCGAAGCACA CCAACCTTCG TACCAGTGGG CCGGACGAAT TGCAACCTTC
ACCGGTTTAC CCACCATTCT CGGTTGGGAA TGGCACCAGA TTCAGCAGCG GAGTGCCGTG
AATGCCGGAC CGGTCATTAC ACATCGGCAG CAGACGATTG CAACCATTTA TAACACACCC
GATCCCGATA CCGCACTGGA TGCCCTGCGT CGTTATGGAG TTGAGTACGT CTATATCGGT
GGGGTCGAGC GACAACTGTA CAGCGCTGAA GGACTGGCCA AATTTGCTGC GCTCGCCGCA
CGTGGCGACT TGATCCTTGC CTTCCAACAG GGCGAGAGCG TGCTGTATCG CGTGCGTTCG
CCGGGTCAAC CACGGATGCT GACCAACGAT CTACCGATTC GCCCGCCGAG CAAACGTACC
ACACCGGCCC TAGAATTAGC CCAACCGGTT CAAGAGTTGC CGGCTGTTGG GCGATTGGGT
TGGAATGCGT TGTTGAACGA ACAGCAGTGG TTGGCGGTTG TGGCATGGCT ACTGGTGTGG
TACGTAATCG CCGGCCTGGG GGCATTGCCG GCATACACGG CACTAGGCCG GTATGGTTTG
GCGTGGGCGC GTCCGGTCGG GTTGATTATG CTCGGCTATG CGATCTGGCT ACCGACGAGC
CTTGGCATAT GGCGCTACGA TACGGTGGGG CTGATCGGTG GTTTGGCCGC GATGGTCGGC
CTTAACCTTG CGCTCTGGGG GCGTGGTATT CGGCCTCATC GTGCTGCATG GCGAGCGATC
GTGCCCGCTG AACTGATCTT TCTCGCCGGG TTTGCGGCGA TGACGTTGAT CCGTGCGCTT
AATCCCGACC TGTGGCATCC GGTTTGGGGT GGCGAGAAAC CGATGGAGCA AGGGTTCCTC
AATGCGATCC TGCGTAGTCC GGTGATGCCA CCCTACGATC CGTTCTACAG CAATGGGTAC
ATCAACTATT ATTACTACGG TCTCTACCTG ATGTCGCTGC CGATCAAGAT ACTCGGTCTC
GATTCGGCGA TTGGCTTTAA TCTAGCGCTG GCTACACTCT TTGGCATACT GTTGGCGGGG
GCCTATGAGC TAGGGCAACA ATTAGGTGGT CGGCGACGGT ATGGGATTGT CGCGTTAGCG
TTGATCGGGT TGGCCGGTAA TCTGACAGCG ATACTTGCCG CAGGCTGGTC GCAAGGTGTC
AGTGGTTTGC GTCTGCTGCT GAGCGGTAAT GCTGAACTCC TTGGGGATTG GTTTGTCGGG
CCTAGTCGAG TCATTCCGTA CACTATCAAT GAGTTTCCGC TCTTCAGTTT TCTCTATGCC
GATCTCCATC CGCATCTCAT CACCCTTCCT CTCTCGTTGT TGGCGATTGG GTGTGCATGG
CGACTGATCG AGCGACACCA TATACAGTCT CGTTCACTCT GGATGCTGAC GGCACTGACC
CTGGGCACGC TAGCGGCGAC CAATTCGTGG GATTTTCCGA CCTACAGCTT GCTATCAGGG
ATAGCGATTA TTGCCGGTGC GGTGCGATGG CATGGATGGC GCTGGCCGGC ACTCACGTCG
GCGATGGTCA AAGCTATTGG GTTAGGTGTC GGGTCGCTCT TGCTCTTCGC TCCCTTCTTC
GACCGTTACT GGCCAATGGT TCGTGGGATT GGCCTGGTAA CGACGCACGC CACACTACCA
TTTGCTTACT TCCTGCTGTA TGGTCTGCCA CTCGTAATCA TTGTGCCGGT GGTCTGCGGA
GCAGCCGTAA AACGCTGGCA GCGCTTCCTA CCGGGGCGTG CATGGGCATT GTTGTTGAGC
GGGATAGGGG TAGTTCTGAT TGTCGGTGCG GCATTGCCAG AGCTGGCTTT GCGTTTTATC
CTCCTCGTTA TTCTTAGTCT CACCAGTGTG CTGTTGGTGC GACGGGCTAC CGGGGCGCCG
GCATGGTATG CTCTCCTCCT TGCCTGGTTA GCGTGGGCCG TATCGTTGGG GGTTGAGATC
GTCTATATCC GTGACCATCT CGACGGCAGC GATTGGTATC GCATGAACAC GGTTTTTAAA
TTTGGGTTGC ATATTTGGGT GTTACTCAGC CTTGCGGCTG CCGGCCTCTT ACCAAGACTG
TTGCAGTGGT TGAACCGGCG CGGTGGTCAA CCGGCCCGTG CGGCGATGTT GACCATCTTG
GCGATACCGG CGCTGATGGC AGCGAGCTAT CTCCCGGTTG CCATTCCTTC GCGGATTGTC
ACCCGCTTCC CGGTCACGAC CGGTCTGACG CTCGATGGGA TGGCTTTTAT GCAGCACGCT
ACTTTCACCT ACGACTGCAA TGCGTTTGGC GGCTGTGCGC CGGATACTTC GATGGTGCAG
GTCGATCTCA GCGGTGATGC GGCGGCGATC CGCTGGCTCA ACCAGCAGAT TGTTGGAACA
CCGGTCATTG TTCAATCGAG CCTCTGGTTC TACCGTGCCT ATGGTATTCG GGTTGCTGCC
GCCACCGGCC TGCCAACGGT CATCAGTGCG TTGCACGCCG ACGAACAGCG TGATCCGGTC
GTCACCGGTC GGCGGGTTCG CGATATTGAA ACCTTCTACA CCACGAGTGA CCCGGAAACA
GCGTTGCGGA TTCTCGCCCG TTACAACGTT GATTATGTCT ATGTTGGTGG AGTTGAGCAT
GCCTTCTATC CTCAAGGCAT GACCAAGTTC GCAGCGTTGC GCGATCGCTA TTTACGACCG
GTGTACGAAC AAGATGGGGT AGCGATCTAT GCCGTAACCG GCTTGCCCGA CAGTTACCGT
CTGTTGCGTG CCGAGACGAC GTCGGTGGTG CAGCCGGTAC CACCGCCACC ACCTCCTAAC
GAACCATCGG TGGATGTGTC CGAGTTAGAG GCTGCCGTTG CTGCCGATCC GACCAATGGT
TCTCTTGCCT TTGGTTTAGC CGATGTGTAT CGCCAACAAG GACGGCTGAG TGAGGCGGCG
CAGGTGTTGG CGACGGCTGC TGCGGCCAAC CCCAGTGATG TCGGTTTACA TCATCTGTGG
GGTGACATCT TGGCCGATCT TGGGCGGTAT GACGAAGCAG AGAAAGCGTA TCTGGCAGCG
GTACAGGCTA GTCCCACTGC CGGCAACTAC AACAAATTAG CGACAGCGTT GATCGATTGG
GGGCGGCTCG ATAAGGCTGA GATTGCCCTA GGGCAGGCGA TGAGCATTGA TCCGGCCTTA
CCTGATCCGT ATTTTCAGCT TGCCCGCCTG TTCATGCTCC GCAACCAGCC CGTCCTCGCC
AGAGATGCGC TACAGCGCTA TTTGCAGTTG GCCCCTGATG GACGCTGGGC TGGGGAAGCA
ACGGTGATGC TGCGCAACCT CGAAGGGGGG CAGCCATGA
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| Protein sequence | MRQALNRSAV WVVRLGLAAI LLLALYFRTL NLFDWDSGTG QHPDERFFTY VASTVRLPSD
LGEFYDSSRS PLNPRNYEQF PLYVYGPLPI MLTRVVAVML TPAEVLPAQV PSIEGPPRLG
ADPTAPQERR TDYGPPVANP ERNWPRFLPL LWWLNPDGVN LTTYSEIVKI GRALAVVFDL
GSVVLVYLIG RRLFGRRIGL LAALLTALTV MHIQQSHFFV DPAFSTFFCL LALYWTVRAA
QGGGVGVYVA LGMSIGAATA NRITMATIGG LAIVAAFIAA QRALRGQRWH ALFDRFWQRE
MWLLVVAGIA TVLTFRGLAP DAFIGSRPDS PLIDSPSILD GAGFFDIRLD PRFRENLITV
RALVTGEYDF PPGQQWVGRP AYLFPWQNMV LWGMGLPLGL AAWGGWLLFA GRYVRRGGWQ
WAVHPSAQIG RPWHPAWVLW VWVAFYFGWQ GSQFAITMRY LLPIYGALTV LGAWALVVLG
RWGRRRATKA VASLRSWAVV AGRGLAWAAR WALPVVLIAT ALWAYAFSRI YTVPHSRVQA
ARWLAEHAPP GSFVISERWD DPLPLQATAN AAWGITFFGI DSSPYAEDEP AKYVGQGGEP
GLLDQLDRAD YITLTSNRVY DSTSRLRMRY PALMRYYHSL FTGELGFELV AEITSYPTVL
GIRLPDWMAE EAFTVYDHPR VLIFRKTPLY SRERAEQLIT AEVEWGEVYK SPLQIADRNP
TALRLTDSVW PRYAAGGDWW SWLGTNPFAP LLWVFWIEAL GLAVFALIGP HLHRLPDRGF
TLAKISGLLL VAYLAWLAGS LQLAPFAPVT LWTIGIGLLG IGAVVGWRAR YTLRRIWQER
LPALLIAETL FIGFLLLGVT LRWFNPDLWH PARGGEKPMD FAYLNAVLRS AAFPPLDPWH
AGGYINYYYF GFVLVGALIH LSGVAPAVGY NLAVATIFAL TAFGAFGVVY NLLAPRLPQL
RRERTAVVAG VLAPGLMLLL GNLAQAGWFL SGYAAKQAAK GRLEWAFWDA TRITPGTINE
FPFFTFLFAD LHAHMIVMPL SLAALGLGLA WVRTGGATHW WLIGWLGLVA GAIRATNTWD
YPTFVGVAGL LLAVATARHQ RRAGWGWPAT VLVALGVGVA PALIGNLLFA PFIANFATDS
SGIEVWRGAG ATLLAAILAA ERTTTSQLVQ IGGHWLAIWL IVIGLWTWRR GISLLIVASL
LAVFLIALVF NVPAIVPLVG LLVVSIWLLW RMRQWPFTVL IPALWALGGI GLWVLVEVVV
VRGDVGRMNT VFKFGLHAWM LLALATAAAM PWLWAATARL AHQWCWSLRA GVGLLLAAGL
VYPLTATPAR LADRWDRDAP HTLDGMAFFA NITAARNGPA YSLDEDAAVI DWLRRNARGT
PIILEAHQPS YQWAGRIATF TGLPTILGWE WHQIQQRSAV NAGPVITHRQ QTIATIYNTP
DPDTALDALR RYGVEYVYIG GVERQLYSAE GLAKFAALAA RGDLILAFQQ GESVLYRVRS
PGQPRMLTND LPIRPPSKRT TPALELAQPV QELPAVGRLG WNALLNEQQW LAVVAWLLVW
YVIAGLGALP AYTALGRYGL AWARPVGLIM LGYAIWLPTS LGIWRYDTVG LIGGLAAMVG
LNLALWGRGI RPHRAAWRAI VPAELIFLAG FAAMTLIRAL NPDLWHPVWG GEKPMEQGFL
NAILRSPVMP PYDPFYSNGY INYYYYGLYL MSLPIKILGL DSAIGFNLAL ATLFGILLAG
AYELGQQLGG RRRYGIVALA LIGLAGNLTA ILAAGWSQGV SGLRLLLSGN AELLGDWFVG
PSRVIPYTIN EFPLFSFLYA DLHPHLITLP LSLLAIGCAW RLIERHHIQS RSLWMLTALT
LGTLAATNSW DFPTYSLLSG IAIIAGAVRW HGWRWPALTS AMVKAIGLGV GSLLLFAPFF
DRYWPMVRGI GLVTTHATLP FAYFLLYGLP LVIIVPVVCG AAVKRWQRFL PGRAWALLLS
GIGVVLIVGA ALPELALRFI LLVILSLTSV LLVRRATGAP AWYALLLAWL AWAVSLGVEI
VYIRDHLDGS DWYRMNTVFK FGLHIWVLLS LAAAGLLPRL LQWLNRRGGQ PARAAMLTIL
AIPALMAASY LPVAIPSRIV TRFPVTTGLT LDGMAFMQHA TFTYDCNAFG GCAPDTSMVQ
VDLSGDAAAI RWLNQQIVGT PVIVQSSLWF YRAYGIRVAA ATGLPTVISA LHADEQRDPV
VTGRRVRDIE TFYTTSDPET ALRILARYNV DYVYVGGVEH AFYPQGMTKF AALRDRYLRP
VYEQDGVAIY AVTGLPDSYR LLRAETTSVV QPVPPPPPPN EPSVDVSELE AAVAADPTNG
SLAFGLADVY RQQGRLSEAA QVLATAAAAN PSDVGLHHLW GDILADLGRY DEAEKAYLAA
VQASPTAGNY NKLATALIDW GRLDKAEIAL GQAMSIDPAL PDPYFQLARL FMLRNQPVLA
RDALQRYLQL APDGRWAGEA TVMLRNLEGG QP
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