Gene Cagg_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2105 
Symbol 
ID7267612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2579985 
End bp2581649 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content58% 
IMG OID643566938 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002463427 
Protein GI219848994 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAT CAACCGATTA TGACGTGATT GTGGTCGGCG GTGGGCACAA CGGGCTGACT 
TGCGCCGGCT ACCTTGCGAA GGCCGGTAAG CGCGTCCTGG TGCTCGAACG TCGGCCTATC
GTTGGGGGAG CCGTCTGCAC TGAAGAAGTG ATCCCCGGCT ACAAGATCGA TGTCGGTTCA
TCAGCCCATA TCATGATTCA TCTCACCCCC ATTGTGCGCG ACCTCGAACT TGAACGGTAT
GGGCTTGAAT ACATCGACAT GGATCCCTAC GCCTTCTACC CCCTCCCTGA CGGGAGTGGC
GCGATCTACT TCTACCGCGA TGTCGAACGT ACATGTCAGA GTATTGCCAC CGTCAGTCCA
CGCGATGCGG AGGCGTACCG CCGCTTTCTC GACTTCTGGA CACCACTGAA TGAAGCCGTA
TTTGACGTGT TCTTAAACCC ACCGTCGGTC ACGCGCTTGT TTGGCAAGGT TGCTTCCAGT
ATTCCGTGTC TGCCGAGATC CGAGCAGAAA GTGCTCGAAG TCACCCGCCG TCTCTTCACC
AGTTATGCGC AACTGATCGA GGAGACGTTT GAGAGTGAGG CGATGCGGGC TGCGATGACG
TGGCTGGCGG CGCAGAGCGG TCCACCACCG GACGAAATCG GTGCCGGCGA TTTCTTCGGT
TGGCACGCGA TGTTGCACTA CAGTGGTGCG AAACATCCAA GGGGTGGATC GGGAATGCTG
ACGCAAGCGA TGGCCCGCTC ACTCAAGGCC ATGGGTGGCG AGGTTGTCCT TGATGCGCCG
GTACGCCGGA TTATCGTCAA TAACGGCAAG GTGCAGGGGG TGGAGACGGC TGATGGCCAA
CGCTATTCAG CGCCGATTGT CGTTTCAAAT GCCCACGTGT TGACGACATT CCTGCAATTG
GTCGGTCCCG AACACCTTAG TGCCGAACTG GTTCGGCGGC TGCATCACAT TCGGATCGGT
AACGGTTTTG GGATGACGGT GCGCTGTGCT GCCGAAGAGT TGCCCGATTA TAGTGCAGCC
CGTAGCTATG GTCGTCCACA CGAGAGCCAT CACGGCCTTC AGTTGCTCAG TCCGAGTATG
AACTATGTGC GGCGGGCTTA CGAAGACTAC CTCCGCGGTG AACCGAGTCG CGATCCGGCG
GTGATTGCGA TGACCTTCTC GGCCATTGAT CCCGACGTTG CACCGCCTGG TAAGCATACG
GTCTTTTTAT GGGCGCAATA TTTTCCCTAT CAACTGAGCG GTAATCGCCA TTGGGATGAT
ATTCGTGAGT CGGTCGCCGA TTCGATCCTC GAGGTACTCT ATCGGTATGC CCCCAATATG
CGCGGCAAGA TTATCGACCG TTTTATCCAG ACGCCACTCG ATCTGGAGCG GCGCATTGGG
CTGTTGCGTG GTAACGTGAT GCACGTCGAG ATGAGTTTTG ATCAGATGTT CTTCTTCCGA
CCTTTGCCAG AGTTGGCCGG CTACCGCACG CCGATCAAAG GCCTGTACCT GACCGGCGCA
AGCACCCATC CGGGTGGTGG CGTGTTTGGT GCGAGTGGCT ACAATACGGC ACGGGTGGTA
TTGGCCGATA CTCGTACACG TCGTTGGGGG CCTATCGCGT TGGGGGCAGG GGCATTGGCT
GCCGGAGCCG TGTTGGCCGG GCGAAAGCTC TTGCGGCTCG GCTAG
 
Protein sequence
MPSSTDYDVI VVGGGHNGLT CAGYLAKAGK RVLVLERRPI VGGAVCTEEV IPGYKIDVGS 
SAHIMIHLTP IVRDLELERY GLEYIDMDPY AFYPLPDGSG AIYFYRDVER TCQSIATVSP
RDAEAYRRFL DFWTPLNEAV FDVFLNPPSV TRLFGKVASS IPCLPRSEQK VLEVTRRLFT
SYAQLIEETF ESEAMRAAMT WLAAQSGPPP DEIGAGDFFG WHAMLHYSGA KHPRGGSGML
TQAMARSLKA MGGEVVLDAP VRRIIVNNGK VQGVETADGQ RYSAPIVVSN AHVLTTFLQL
VGPEHLSAEL VRRLHHIRIG NGFGMTVRCA AEELPDYSAA RSYGRPHESH HGLQLLSPSM
NYVRRAYEDY LRGEPSRDPA VIAMTFSAID PDVAPPGKHT VFLWAQYFPY QLSGNRHWDD
IRESVADSIL EVLYRYAPNM RGKIIDRFIQ TPLDLERRIG LLRGNVMHVE MSFDQMFFFR
PLPELAGYRT PIKGLYLTGA STHPGGGVFG ASGYNTARVV LADTRTRRWG PIALGAGALA
AGAVLAGRKL LRLG