| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2099 |
|---|
| Symbol | |
|---|
| ID | 7267606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2574068 |
|---|
| End bp | 2575357 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643566933 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002463422 |
|---|
| Protein GI | 219848989 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGA TTGTCATTCC CTTTCAGATT GTGATCGGCG CCCTCACGCC ACAAGGCTAC
CCGTTGCGTG CCCTGTGCGG CGAGCGCACG GTCGAAGCGA CGATGACCCC ACCAGTGCTG
ACGGCATCCC CGGCAGAGAT GGGCGTTGAG TTGGGCAACA TGCTACTGCA AGCACCCATT
CGGAGCCTGC TTATTGAAGC TGCCCGCGAA GCTATCGAAC AGGGCGCACG GATGCAGATG
CGGCTGGTCA TCGAAGCTCC AGAATTAGTA ACCCTCCCGT GGGAATGGAT AGCACTGCAT
AAAGGCGAAC AGCATTGGCA ACCGGCTCTT CGCGAAGATT ACACACTTGT GCGAATGAGC
ACCCGTGCCA TCCGGCCATT ACCACCTCGT CGGGTAAGTG GGCCGCTACG GCTCTTGATC
GCGGTTGCAC GCGGTTATGA AGCAACCGCC GATACATTAG GCGAGGCACT GATCGAACCT
GTTCGGGCCG GTCTGTTGGT GGTAGACCGA TTACGTGACG CAACGGCTGA TGAGGTGGTA
GCGGAGTTGG CCGCCGAGCC ACGCCATATG TTGCATATCA TCGGCGACAT CGAACAGCCG
CTACGGCAAG CCCCTCGGCT CCGCTTGGGC CGTGCGGTAA ATGCCAACGA ACTGGCCGAG
CTGCTGGTAA GCCTCGATGA TCTCCGGTTG ATCACAGTAG CCGGAACGCC ATCTGAGGCT
TGTACCATCT TTGCCGCCAA TCTCCACGCC GCCGACGGTC GGGCCGTGGC CGCATTACCC
AACATAAACC CAACTGCCCA AGCCCACTGG AGTACCGCCT TTTATCAAGC ACTGGCCAGT
GGTGAACCGG TTGATATTGC GATGACGAGT GGCCGCACGG CGTTGATGAA TGCTGCCGAA
CCTTGGGGCG CACCGCAGCT TTACCTCGCG CCCGGTGGCG AACAGCTCTT TCGCCCCGGC
GAACCGCCGA TTGCACCGGT CCCATCGGAA GCAATCCGTC CCCTTCGTCA ACCTGCAGTG
CCGTTACGCC GACCACGCTT CACTCCTACC GAAACGGAGG TCGGTACACC AACGCGCCGA
CTACACACCT TGAGGCGCCG GTTTCATCTC CAACCACAAG TGATTGCCCT GATTATTGCC
GGTTTGGTCC TGATCCTCTT GGTCAGCCAG GTGATCAACG TGCCGGGAAG TAACGTGCTC
CCGACCCCGG TGGCTACGCC CACTCCACCA CTATTGCTCG ATCCAGTGCG GATTCCGGTG
CCAACCCTCT TCCCAACACC GGCACCGTAA
|
|---|
| Protein sequence | MQEIVIPFQI VIGALTPQGY PLRALCGERT VEATMTPPVL TASPAEMGVE LGNMLLQAPI
RSLLIEAARE AIEQGARMQM RLVIEAPELV TLPWEWIALH KGEQHWQPAL REDYTLVRMS
TRAIRPLPPR RVSGPLRLLI AVARGYEATA DTLGEALIEP VRAGLLVVDR LRDATADEVV
AELAAEPRHM LHIIGDIEQP LRQAPRLRLG RAVNANELAE LLVSLDDLRL ITVAGTPSEA
CTIFAANLHA ADGRAVAALP NINPTAQAHW STAFYQALAS GEPVDIAMTS GRTALMNAAE
PWGAPQLYLA PGGEQLFRPG EPPIAPVPSE AIRPLRQPAV PLRRPRFTPT ETEVGTPTRR
LHTLRRRFHL QPQVIALIIA GLVLILLVSQ VINVPGSNVL PTPVATPTPP LLLDPVRIPV
PTLFPTPAP
|
|---|
| |