Gene Cagg_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2088 
Symbol 
ID7267595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2552826 
End bp2553599 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID643566922 
Producthypothetical protein 
Protein accessionYP_002463411 
Protein GI219848978 
COG category[S] Function unknown 
COG ID[COG3375] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.610127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA CGATCCGGCC CATCGCCACG TATGCCGAAT ACCTTGCCTG CGAACAACTC 
CAACGTCTCG TTTGGGGCAG TGATTTTACC GTGCCGTTGA ACATGCTGGT CACCGTACAG
CGCAACGGCG GATTGGTGTT GGGTGCCTTC GCCGGTAATG AACTCGTTGG CTTTGTGTTT
GGTTTTTTGG CCCGCACTGC CGATGGCCGA TTAAAACACG CCTCACATAT GGCCGCCGTC
CGGCCCGATC TCCGTGATCT GCGGATCGGT GAGCGCCTCA AGCGGGCGCA ACGTGAGTTT
GTCCGATCCC AAGACCTCGA ATTGATCACG TGGACGTTTG ATCCCTTGCT GGCCCGCAAC
GCTCATCTGA ACATTCACAA GCTCGGTGCT ATTTGCCGCA CCTATATGCG GAATGTGTAT
GGGCCGGAGC CGGAATTGCT CGATGGTATC CTCCCAAGTG ATCGGTTTCA GGTCGAATGG
TGGGTTGTTC AATCGCCGGT TGACCGACCA CCGACCGAAC ACGTTGCGAC AGCACCTCTG
ATCAATCCGT CGCTCGATGC GCCACCGGAT ATTGGGCACG AACCGGTCGT TCGGTTGCGC
ATTCCGCTTG ATTTCAGTGC TATACAACAA CACGATCCTG GGGCGGCACA AGCCTGGCGT
TACCATTTCC GTTCCTGCGC CGAAGCGGCT TTTGCCGCCG GGTACGTGGT GGTCGATTTT
GGTCGGATCG ATCCGACTTT CGGCGCGTAT GTGTTGGTCA AGTCGGGCAG CTAG
 
Protein sequence
MQITIRPIAT YAEYLACEQL QRLVWGSDFT VPLNMLVTVQ RNGGLVLGAF AGNELVGFVF 
GFLARTADGR LKHASHMAAV RPDLRDLRIG ERLKRAQREF VRSQDLELIT WTFDPLLARN
AHLNIHKLGA ICRTYMRNVY GPEPELLDGI LPSDRFQVEW WVVQSPVDRP PTEHVATAPL
INPSLDAPPD IGHEPVVRLR IPLDFSAIQQ HDPGAAQAWR YHFRSCAEAA FAAGYVVVDF
GRIDPTFGAY VLVKSGS