| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2082 |
|---|
| Symbol | |
|---|
| ID | 7267589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2546589 |
|---|
| End bp | 2548571 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643566917 |
|---|
| Product | NHL repeat containing protein |
|---|
| Protein accession | YP_002463406 |
|---|
| Protein GI | 219848973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTAC GTTTGCTGAT CGCCTTACTC CTTACGACAC TGATCAACGC TTGTGGGACA
CCACCGCTTC CAACACCGGA ACCGGTCGCG CTTGGTCCGA CGGCAGTGAT ATTGAACGAA
GCGACCACGT TTAGCGAATT GAACGTGCGG TTACGCTTAC CTGCCGGCTG GCAGAGCCGC
ATCGAGAGTG GGATGTTGCG ACTCGCTCCC AACATGACAA CCCTCGAAGC CGATGTCATC
AATGAGCCGA TGATCCTCCT TGATACCACA TCACTTACCA CCTTGACCAC GCAATACGGT
TCGTCGGCCG CTAACCCGGA AACCATTTTC GAGCTGGCGA GTGGTGCGAT CCAATCGGCC
GGTTATACCA TAGCACCTAC CAAACCGATA CACCTTGGCA ACGCACATGG CGTAGTTGCC
GACATTACCG GACCGACCAG TACCGGTCGA TTACTCGTCC TCATTGACGA GACCCGTGCA
GTACGCATTT TGGTACAGGC GGCAAACGAC CAGTGGGTAC GATCACAAGC GCTGATCGAC
AGCATACTGG CAACCATCGA ACTGCTCCCC GTACCATCCC CTACACCTAC CCCGACCAAT
CTTGCCGCCC AACCACAAAT TGTGCGCTCT GGACCACCGG GCTTTGTGAT GCGGATCGGT
GGGCGGAGTG GCCCGGCCAA CAGCCGCTTC ATTGCCGCCC GCGGCTTAGC CGCCGCACCC
GATGGGACGA TCTACTTGGC CGAAAGCGGA CGTGGGGTCT GGGTCTTTGC CCCCGACGGG
ACATTACGCC AGACGTTCGG CGCCGATGAG CTACTCGACG CCTACGACGT AGCCCTCGGC
CCTACAGGCG ACATCTACGT CGCCGATTAT GGTCGTAACG CTATCGTCCG TTTTAGCAGC
GATGGCACCT TCCTCAGTCG ATGGGGCGGC CATGGCGACG CACCTGACCA ATTTGGGCTT
TCAGCACCCC AACGGATTGC AGTGGGGAAT GACGGCAGTG TCTACGCGCT CGATACTCGT
CCTGGTGCGG ATGGGCTAGC CGCAAGTAGT ATTGTGCGTT TCAGTGGTGA AGGGCGCTTC
CTTGAACGGA TCGAACTACC ACCCGATTTA GCGCCGGCCG ATTTAGTCGT CGACCCCGGT
GGTGTCATCT ATCTGGCCGA GAATTTTGCC GGCGTGATCG TTAAGCTTGC CCCCGACGGT
ACAGTTATCG CCCGCTTGGG CGATCCGGCC GATCCTACGC AATTCGCCGG ACCGGTACTC
GATCTTGATC GGGCCGGTTA TCTCTATCTT GCCACCTATA CCGGCATCAT CTTACGACTG
GCGCCCGACG GAACGATTGT CGCACGCGGG GGTAGTCCGG CTACCCCCGG CAGCCTGCCG
AACCCCGGAG AGATCAGTCT GCCCAACGGA ATTGTGGCTG CACCCGGTGG TGTTGTATGG
GTGAGCGACA ACAGTGGTGA GTACAGCGCA ATCTCGGCAT TTCGGCTCCA AACCGACGCC
GCGGCCCTAG CCACGGCAAT GGCACTCACG CCTACCGCCC TCACAGTGGT CGAAACAGCG
CAGCAGTGGG CGGTTGCGGC TACCGCCAGC AGCTTCTACG CTCCCGACTA CGATCCTGAC
GGCGTCATCG GCCCACCCAA CGTACCTGGC TGCCAAGACA GTCCTGACGC TTGGGCGCCG
GCCATCCCCG GCAGCCGTGA AACCCTCACC GTCACCTTTG CCGAGCCAAT GTTTGCCAGT
GCTCTGACCA TTTATCAAAA CCACCAACCC GGATACATCA CGCATGTCGA ACTTATTGAT
GAGCAGGGCA CTGTGCGAAC AGTCTACCGC GCCGACCCCA CCCCTGCGCC AGAGTGTCCG
TTTGTCACCA CGATCACCTT CGAGCAAACA CTCACACGTA TTGTTAAGGC GCAAATCACG
CTTAATCAGC GGGATGGCAG TTGGAGCGAG ATCGATGCGG TGGCCTTAAT CGGCATACCC
TAA
|
|---|
| Protein sequence | MRLRLLIALL LTTLINACGT PPLPTPEPVA LGPTAVILNE ATTFSELNVR LRLPAGWQSR
IESGMLRLAP NMTTLEADVI NEPMILLDTT SLTTLTTQYG SSAANPETIF ELASGAIQSA
GYTIAPTKPI HLGNAHGVVA DITGPTSTGR LLVLIDETRA VRILVQAAND QWVRSQALID
SILATIELLP VPSPTPTPTN LAAQPQIVRS GPPGFVMRIG GRSGPANSRF IAARGLAAAP
DGTIYLAESG RGVWVFAPDG TLRQTFGADE LLDAYDVALG PTGDIYVADY GRNAIVRFSS
DGTFLSRWGG HGDAPDQFGL SAPQRIAVGN DGSVYALDTR PGADGLAASS IVRFSGEGRF
LERIELPPDL APADLVVDPG GVIYLAENFA GVIVKLAPDG TVIARLGDPA DPTQFAGPVL
DLDRAGYLYL ATYTGIILRL APDGTIVARG GSPATPGSLP NPGEISLPNG IVAAPGGVVW
VSDNSGEYSA ISAFRLQTDA AALATAMALT PTALTVVETA QQWAVAATAS SFYAPDYDPD
GVIGPPNVPG CQDSPDAWAP AIPGSRETLT VTFAEPMFAS ALTIYQNHQP GYITHVELID
EQGTVRTVYR ADPTPAPECP FVTTITFEQT LTRIVKAQIT LNQRDGSWSE IDAVALIGIP
|
|---|
| |