Gene Cagg_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2061 
Symbol 
ID7269220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2523942 
End bp2524805 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content58% 
IMG OID643566896 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_002463385 
Protein GI219848952 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.615974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGT TGACGTACCG ATACGACGGA TTTGAACGTG TAGGCGCGCT GCGCGGTGAT 
GAGGTGATCG ATCTGTCGCT GGTGGCAGCA TCAATGTTGG CGCTCATTGA GGGCGGACCG
TTGCTGTTGG CCGAAGCGCG TAAGGTGGTG GAGGAAGCCG CCGGTGGGCC GGCATTGGCC
GCCGTTGAGC TGCGCGCACC GATCCCTCGA CCACGCAAGA ATATCATCTG TCTGGGGATG
AACTACGCTG CCCACGCCAT TGAATCCTTG CGTGCGAAGG GGTTACCCGA AAAATTGCCG
CAACATCCGG TCTTTTTCAG CAAGATGCCT ACGGCTGTGA ATCATCCAAA TGCGCCGGTC
CCGCTGTTGG CGCACGTGTC AACGCAGCGC GACTGGGAGG TAGAACTGGC AGTGGTTATC
GGACGACAGG GACGCGATAT TCCGGCGAGC GAGGCTTACG AGTACGTGTT CGGCTATACC
ATCCTCAATG ACGTGAGCGC ACGTGATTTG CAGTCACGGC ACCAACAGTT CTTCTATAGC
AAGAGCCTCG ACGGCAGCGC ACCAATGGGA CCGTGGATCG TTACTGCCGA TGAGATTCCC
GATCCGCACG CTCTTGGTAT TCGCCTCCGC CTCAACGGAG AGTTGGTGCA AAACTCGGTG
ACCCGCGATA TGATCTTCGA TATTCCGACC TGTATTGCTA CCTTTAGCCG CGGTGTTACG
CTCGAACCCG GTGATATTAT CGCTACCGGT ACTCCCGCCG GTGTCGGTAT GGGTATGACG
CCGCAGCGTT GGCTTAAGGC CGGCGATGTG ATGGAGGCGG AAATCGACGG CATTGGCGTA
TTGCGGAACG TCGTCGTGGA ATAG
 
Protein sequence
MKLLTYRYDG FERVGALRGD EVIDLSLVAA SMLALIEGGP LLLAEARKVV EEAAGGPALA 
AVELRAPIPR PRKNIICLGM NYAAHAIESL RAKGLPEKLP QHPVFFSKMP TAVNHPNAPV
PLLAHVSTQR DWEVELAVVI GRQGRDIPAS EAYEYVFGYT ILNDVSARDL QSRHQQFFYS
KSLDGSAPMG PWIVTADEIP DPHALGIRLR LNGELVQNSV TRDMIFDIPT CIATFSRGVT
LEPGDIIATG TPAGVGMGMT PQRWLKAGDV MEAEIDGIGV LRNVVVE