| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2028 |
|---|
| Symbol | |
|---|
| ID | 7269187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2489072 |
|---|
| End bp | 2490214 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643566863 |
|---|
| Product | permease |
|---|
| Protein accession | YP_002463352 |
|---|
| Protein GI | 219848919 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGAA TGTCTGTGTG CACACGGCTT GAAGGAGTCC TGCCACTGCT CTCACTCATT
GTCCTGCTGG CCATTATTGG TCAAGTCGTC ATGCAAAGCG TGATCACATG GGCTACCGGC
AATGAGCTAT CTCAGATTGT GCCGGTCTTC GAGGCACCGA TTGCCAACGC CGGCAAAGCA
CTAGGCGCGC TGCTTACCGC GTGGATGCCG AGATGGATCA TCGCAACGCC GTTTGGGCCA
CTTGACATCA AATATACTGT CGCATATACG ATCTACGAAT GGTTCAAGTT ACCGATCATT
CTTTTCCTTA CCACGTTCGG GATGATGCTC CTTCGGTTAG GCGTGAGCAC GGTTTGGCTT
GAGCGAACGT TGGGGCGCAA CGATGTGATC GGCATTCTTG GTGGAACCCT GCTAGGAATG
GTGACACCGG TCTGCTCGTG TACAGTGACG AATATTTATG CCGGGTTAGC AGCCGGCGGC
GCTAGTCGCC GTGCCTCAGC GGCCTTTCTC TTTGCTAGTC CGGCGCTCAA CGAGTTTGCT
ATCATCTTTA TGTTTGTCAT CGTCGGTCCA CTTGGTGGGG GTGTGTACGT AGTGGCCGGA
GTGATTGCTG CCATAATCAC CGGTTATCTC GCCCCAGTAT TGGGTCTCGA TCCGCATCGC
TTTCTTCAGC CCATATTACG CTCGCCATTC CACGACTCGC TAGACCGCTC CAATATCTTG
ATACGCGCCC ATCAAGAAGC ATGGGCGCTG TTTAAACGGC TGATTGGGAT TGTGCTGTTT
AGTGGGCTAC TAGCCGGGAT TTTGGTTAAT TTCAATCTGA CGTTGGTTGA GGCACTGAAG
CAGGCCGGCA GCGTATGGTG GGGGCCGATC CTTGCAACTG TGTTCGGTTT GCCACTCGAC
ATTAATGCGG CCTCTACTGC CCCGACTTTG GTAGCGTTGC ATCAGATCGT GCCACTTGGC
ACATTAGTGT CTGCTATGAT GGCTACGACT GTCTCGTCGA TCCCCGAATG GGCAATGCTG
AACCGGTTGC TTGGTCGAGC TGCTGCGAGT AAAGTAGTGC TTTGGTATGG TTTGTACGTG
ATCGGATTAG GGTTATTGCT CAATTGGTTA TTCGGCTACC GAATGGTCAT GACTGCGGCA
TGA
|
|---|
| Protein sequence | MRRMSVCTRL EGVLPLLSLI VLLAIIGQVV MQSVITWATG NELSQIVPVF EAPIANAGKA
LGALLTAWMP RWIIATPFGP LDIKYTVAYT IYEWFKLPII LFLTTFGMML LRLGVSTVWL
ERTLGRNDVI GILGGTLLGM VTPVCSCTVT NIYAGLAAGG ASRRASAAFL FASPALNEFA
IIFMFVIVGP LGGGVYVVAG VIAAIITGYL APVLGLDPHR FLQPILRSPF HDSLDRSNIL
IRAHQEAWAL FKRLIGIVLF SGLLAGILVN FNLTLVEALK QAGSVWWGPI LATVFGLPLD
INAASTAPTL VALHQIVPLG TLVSAMMATT VSSIPEWAML NRLLGRAAAS KVVLWYGLYV
IGLGLLLNWL FGYRMVMTAA
|
|---|
| |