Gene Cagg_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2012 
Symbol 
ID7269170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2468771 
End bp2469703 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content59% 
IMG OID643566846 
Productinitiation factor 2B related 
Protein accessionYP_002463336 
Protein GI219848903 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCAT TTATCGCCCG GTCCGTTGCC GCGATTGCGG CCGATACGGT CTCAGGCGCG 
GTAGAGATTG CTAAGAAATG CGCCGAGGTG TTGGCCCGCG CTGTCCGCAG TCGGCCGATG
AGCAATCGCG TCGATGTACA ACACGAGGTG CTGACCGTCG GGCGGGCATT GATGCGTAGC
CATCCGACGG TGGCACCGCT GGTGAATCTC GTCAACAGTT TACTCTGGCG ACTTGAAGAG
GCGGGAGATA GTGAAAGCGC AATCCGGCTG GTTGATGAGA CGACCAACGA TTTTCGCCGT
CGCTTGCACG TACACGAAGC AGCCATCGCG GAAACGACGC TACGGTTAAT CGGTGAAGAA
GCGCGGATTT TGACCATCGG GCGTAGCACG ACGGTTCGCG CTGCTTTGCG CCATGCCCAC
CGCGCCGGAC GACGACCACG CGTGATTTGC ACCGAGAGCC GCCCACTCGG AGAAGGGCGT
ATGCTGGCCG GCGAACTGGC CGCCAGTGGC ATTCATACGA CGTTAATTGC CGATGCCTCA
GCAGCGACGC AAGTTGCACA ATGCAATCTC GTTCTGGTCG GCGCGGATCT CATTAGTAGC
GATGGGCTGA TCAATCGCGT CGGTACCTAT CCTCTGGCAC TGGCCGCACA AGCTGCCGGT
GTCCCCATCT ATACGCTATG TTCGAGCGAA AAGCTATTAC CATTGGGGTA TCGTTTACCG
ACTCAATCAA TCCAGTCGAT CAATCAGTTG TGGACCGAAG CACCACCAGG CATTACCGTA
CATACCGCGT ACTGCGACCG CACGCCGCTC GACCTTCTCA CCGGTATTAT TTCCGAACGG
GGGATTGCAC CGCCGGTTGG GATAGAGGCG TGGTTGGCGG CAACGCATCT CCATCCGTTG
CTTCGCAACG GTCTGGATGA GCCTCACTCG TGA
 
Protein sequence
MDPFIARSVA AIAADTVSGA VEIAKKCAEV LARAVRSRPM SNRVDVQHEV LTVGRALMRS 
HPTVAPLVNL VNSLLWRLEE AGDSESAIRL VDETTNDFRR RLHVHEAAIA ETTLRLIGEE
ARILTIGRST TVRAALRHAH RAGRRPRVIC TESRPLGEGR MLAGELAASG IHTTLIADAS
AATQVAQCNL VLVGADLISS DGLINRVGTY PLALAAQAAG VPIYTLCSSE KLLPLGYRLP
TQSIQSINQL WTEAPPGITV HTAYCDRTPL DLLTGIISER GIAPPVGIEA WLAATHLHPL
LRNGLDEPHS