Gene Cagg_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2011 
Symbol 
ID7269169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2467659 
End bp2468780 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content58% 
IMG OID643566845 
Productglycosyl transferase group 1 
Protein accessionYP_002463335 
Protein GI219848902 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTT TTGCCATCGA TGCCCGTCTC AATGCGTACC GGCAGGGTGG AATTGCTCAT 
TACACGCAGA GCCTCGTGCG AGCTATGGTG CCACTGCTGG CCGATGAGGA AGAGCTGCTC
GTCCTTGAAC ACGTCCGTGC GCATATGCCA CTGGTAAATG GTCTGCGGCG TAGTCGATTG
CTCACGCCGC CCCACCATCG GTTTGAGCAA CTCAGTTTGC CGGTAGAAGT GTGGCTACGC
CGACCGATGC TCTTGCATAG TCCCGATTTT ATACCGCCGC TCGTACATTC ATGGCGGACG
GTCATCACGA TCCACGATCT GGCGTTTCTC TATTTTCCCG AGATCCTCGA CCGTGCTGCT
CGGCGGTATT ATAGCCGTAT CTATCAGGCA GTAGCCGGCG CCGATGCGAT TATTGCGGTA
TCACAGGCGA CTCGTGATGA TATTGTCGAA CGACTAGGCG TGCCACCGGA GCGAGTGTCG
GTCATTTATG AGGCAGCCGA TGATGATTTT CGACCTTTGA CCATACCCGC CGGTACGACC
CGCATCATCG ACGGTCAGAC GTTGATCGCC GACACGTTTC TGCTCTTCGT CAGTACCATC
GAGCCGCGAA AAAACATTCC CACCGTGCTG CAAGCGTTAC GGATCTGTTG CGATCGGCGC
CCATCGGCGG GCTACCGGCT GGTTTTGGCC GGTGCGCGTG GTTGGCTTGA TGAACCGATT
TTGGCGCAGA TCGGTGAGTT AGGTTTGAGT GATCGGGTAA TCCGCATCGG CTTCGTGGGC
AGGGAGGATC TACGCTGGCT GTATGCTGCT TGTCGAATCT ATCTCAATCC ATCGCGATAC
GAAGGATTTG GCTTGCCGGC GCTCGAGGCG TTGGCCTGCG GAGCGCCGGC CATTGTGTCT
GACACCAGCA GTCTACCGGA GGTCGTCGGT GATGCAGCAT GGTTAGCGCC ACCACTCGAT
CCCTTGACGT GGGCCGATCT CATCGAGCAG CTCTGGCACG ATGAGGCAGC ACGGTCCGAC
CTCAGCCGGC GAGGTCCGCG ACAGGCAGCC CGTTTCTCGT GGCAGACAAC CGCGCAACAG
ACCCTAGCAC TCTACCGGCG ATGTATTAGG CATCACGAGT GA
 
Protein sequence
MIRFAIDARL NAYRQGGIAH YTQSLVRAMV PLLADEEELL VLEHVRAHMP LVNGLRRSRL 
LTPPHHRFEQ LSLPVEVWLR RPMLLHSPDF IPPLVHSWRT VITIHDLAFL YFPEILDRAA
RRYYSRIYQA VAGADAIIAV SQATRDDIVE RLGVPPERVS VIYEAADDDF RPLTIPAGTT
RIIDGQTLIA DTFLLFVSTI EPRKNIPTVL QALRICCDRR PSAGYRLVLA GARGWLDEPI
LAQIGELGLS DRVIRIGFVG REDLRWLYAA CRIYLNPSRY EGFGLPALEA LACGAPAIVS
DTSSLPEVVG DAAWLAPPLD PLTWADLIEQ LWHDEAARSD LSRRGPRQAA RFSWQTTAQQ
TLALYRRCIR HHE