Gene Cagg_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2010 
Symbol 
ID7269168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2466889 
End bp2467662 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID643566844 
Productbeta-lactamase domain protein 
Protein accessionYP_002463334 
Protein GI219848901 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTAC GTTTTCTCGG CACCGGTACC TCGATGGGCG TTCCCGTTAT CGGCTGCAAT 
TGCCCGATCT GCACCTCATC CGATCCACGT CACCACCGTT TGCGGACTTC GGCGCTTGTT
CGTAGTCATG GTCTCACCAT TGTAATTGAC GCCGGACCAG ACTTTCGGTT GCAGGCACTT
GCTGCCGGGT TATGTCGGAT CGATGCAGTC CTGCTTACCC ATGCCCATTT TGATCATGTG
GCCGGTCTCG ATGATTTACG GCCGTTTTGT CTACGCCAAG GAACGGTGCC GATCTACGGT
AGCCCGCAAA CACTCGCCGA TGTGCGTCGA CGTTTCGCCT ACGCATTTGA TGAGAGTTCG
TCGGGTTCGT CACGCCCGGC AATTACGCTA CATCCGGTTG AAGCGCCATT CCAGCTTGGC
GCGCTGACCA TCGTACCGAT CGCAATTCCT CACGGCACGT GGACGATTAC CGCCTACCGC
ATTGGCCCAT TAGGGTATGT TACCGATGCG AGTGCAGTAC CACCGGATGC GGTCGCTACC
CTACGAGGGG TGCAAGTGTT GGTACTAAAT GCCTTGCGTG TTGAACCACA CCCAACCCAT
CTCTCGATTG CCGAAGCGGC CGAAGTGGCA GTAGCCGTAG GCGCACCTCG TACCTTTCTC
GTTCACATGA CCCATACCGT CGATTATCGG GCTGACTACG GGTTACCGCC TGAGGTGACA
TTTGCCTACG ATGGCCTTGA GGTCGAAATC GAATCACCGT CGAGTTGCCC ATGA
 
Protein sequence
MQVRFLGTGT SMGVPVIGCN CPICTSSDPR HHRLRTSALV RSHGLTIVID AGPDFRLQAL 
AAGLCRIDAV LLTHAHFDHV AGLDDLRPFC LRQGTVPIYG SPQTLADVRR RFAYAFDESS
SGSSRPAITL HPVEAPFQLG ALTIVPIAIP HGTWTITAYR IGPLGYVTDA SAVPPDAVAT
LRGVQVLVLN ALRVEPHPTH LSIAEAAEVA VAVGAPRTFL VHMTHTVDYR ADYGLPPEVT
FAYDGLEVEI ESPSSCP