Gene Cagg_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2006 
Symbol 
ID7269164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2452766 
End bp2453038 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content51% 
IMG OID643566840 
Productphosphocarrier, HPr family 
Protein accessionYP_002463330 
Protein GI219848897 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG TTGTTTTGAC GGTGAATAAT CCTGTTGGTT TGCATGCCCG CCCGGCTAAG 
CTGTTTGTTG AGACGGTGCG GGCGTATAAG AGCACTGTGA CCATTCAGAA TCTCAGTCGG
CCCCAAACGA AAGAACTACC GGTAACGGCT TTTAATTTGT TGCAGATCGG GGTGCGTCAA
GGCCACCAGA TCCGGTTACG TGCCAGTGGT GAGGACGAAG CTGAAGTCAT CGCTGCTTTG
ACCAGGTTGG TCGAAGAGAA TTTTGGCGAG TAG
 
Protein sequence
MTEVVLTVNN PVGLHARPAK LFVETVRAYK STVTIQNLSR PQTKELPVTA FNLLQIGVRQ 
GHQIRLRASG EDEAEVIAAL TRLVEENFGE