Gene Cagg_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2004 
Symbol 
ID7269162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2451724 
End bp2452371 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID643566838 
Productdihydroxyacetone kinase, L subunit 
Protein accessionYP_002463328 
Protein GI219848895 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.419483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTA CTGTCGAACA CGTCACGCAC TTTCTCACCG CAGCAGCAGC GTTAATCCAT 
GAGCGGCGCG ATGAGTTAAC CGCGCTTGAC GCCGCGATTG GCGATGCCGA TCACGGGGCA
AACCTCGACC GTGGGTTTAC CGCTGTGATG GCACGTCTGC CGAGTGTGGC CGATAAAGAT
ATCGGTACTG TGCTGAAGAC CACCGGGATG ACAATTGTTT CTACCGTGGG TGGCGCCTCA
GGGCCATTGT ATGGCACGGC TTTTGTCCGG GCAGGGATGG CGTTGGCCGA TCGGCATGAG
CTAAGTACCG AGGAGGTACT ACTCGCCCTC GAAGCAGCAC TTGATGGGAT TGTAGCGCGT
GGTAAAGCGC AGCGTGGTGA AAAGACGATG GTTGATGCGC TTGCTCCGGC AATCGAGGCG
CTGCGGGCCG CGTTAGCTGC CGGTGAGCCG CTGGGTCGGG CGTTGCAGGC GGCTGCGGAT
GCGGCTGAGG GCGGCGCGAA AGCAACTATC CCTATGCTTG CCCTGAAGGG GCGGGCGTCG
TATCTCGGTG AACGCAGTAT CGGTCATCAG GATCCGGGAG CAACTTCGAC AGCGTATCTG
CTCCGTGCGC TGGCGATGAC GTGTAGCCGT GTTGAGGAGG GCGCATGA
 
Protein sequence
MPITVEHVTH FLTAAAALIH ERRDELTALD AAIGDADHGA NLDRGFTAVM ARLPSVADKD 
IGTVLKTTGM TIVSTVGGAS GPLYGTAFVR AGMALADRHE LSTEEVLLAL EAALDGIVAR
GKAQRGEKTM VDALAPAIEA LRAALAAGEP LGRALQAAAD AAEGGAKATI PMLALKGRAS
YLGERSIGHQ DPGATSTAYL LRALAMTCSR VEEGA