| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1986 |
|---|
| Symbol | |
|---|
| ID | 7268902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2426404 |
|---|
| End bp | 2427438 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643566817 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_002463310 |
|---|
| Protein GI | 219848877 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00630154 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA AACTCTGCAA CCTGGACCAG ACAAAACAGA TCGCAGTGTT TGGCTGTGGT
TATTGGGGTA AGAACCTTGT ACGTAATTTC TACCACCTTA ACGCGCTTCA CTCGGTATGC
GATACTACGG ATTCAGGTCG GGCAACGGCA GCCAGTATTG CACCTAACTG TCGCATCGTT
GCCGATATCA CTCCCATTCT TGCTAATCCA GAGATACGTG GAGTAGTGAT TGCCACCCCT
GCCGAAACAC ATTTCGCGTT GGCAAGGCAA GCATTACTGG CCGGCAAAGA TGTATTGGTA
GAAAAGCCAC TCGCGTTAAC TTTCGAGCAG GGTGCAGAAC TAGTCCGGCT TGCAGTCGAT
ATGAACCGTA TTCTGATGGT CGGCCACGTG TTGGAATATC ATCCCGGTAT TATGCAACTG
CACAACTTAA TTGAGCATGG TGAATTGGGT AAATTGCAGT ATATTTACTC TAACCGCCTA
AGTCTCGGTA AAGTACGGCG AGAAGAAAAC ATTCTCTGGA GCTTTGCTCC ACATGACATC
GCGGTTATCC TGCGCCTTCT TGGCAGTATG CCGTTTGAAG TTATTGCTTG CGGTGGGGCA
TACGTACAAC CGAATATTGC TGATGTAACA GTGACTCACC TCCTATTTGA TAACGGAGTA
CGCGCTCACA TCTATGTCTC GTGGTTGCAC CCTTTTAAAG AACAACGATT AGTTGTAATC
GGCTCGCGTA AAATGGCCAG TTTCGACGAT GTACACAAAC GTCTCACGCT TTATGATAAA
CGTGTGGAAT GGCAAGAAGG TCAACCTATC CCGATTCACG GCGATGGTAT AGAAGTACCA
TATCCGCAGG ATGAACCACT ACGTCTGGAA TGTGAAGCTT TTTTGGCTGC GATCACGACC
CGTAATCCAC CGATCACTGA CGGTCAAAGT GGTTTACGGG TGTTACGCGT ATTACAAGCT
GCTCAGCGAT CGTTAATAAC AAACGGTCAA CCCGTACATT TACCTATGGA CCCCGCTCTC
GAAAATTATC ACTAG
|
|---|
| Protein sequence | MSNKLCNLDQ TKQIAVFGCG YWGKNLVRNF YHLNALHSVC DTTDSGRATA ASIAPNCRIV
ADITPILANP EIRGVVIATP AETHFALARQ ALLAGKDVLV EKPLALTFEQ GAELVRLAVD
MNRILMVGHV LEYHPGIMQL HNLIEHGELG KLQYIYSNRL SLGKVRREEN ILWSFAPHDI
AVILRLLGSM PFEVIACGGA YVQPNIADVT VTHLLFDNGV RAHIYVSWLH PFKEQRLVVI
GSRKMASFDD VHKRLTLYDK RVEWQEGQPI PIHGDGIEVP YPQDEPLRLE CEAFLAAITT
RNPPITDGQS GLRVLRVLQA AQRSLITNGQ PVHLPMDPAL ENYH
|
|---|
| |