Gene Cagg_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1981 
Symbol 
ID7268897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2420055 
End bp2421347 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content42% 
IMG OID643566815 
Producthypothetical protein 
Protein accessionYP_002463308 
Protein GI219848875 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0161079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAA AAATACTCAT AGTAACCGCG TTTTTTCCAC CTCTAAACAT GATCTCTTCG 
CTGAGAACCT ACTCGTGGGC AAAATATTGG TCTCAGCTAG GATGTGAGGT AACCGTTCTC
ACTACACCAA AAGAACCACG ATACTCCACA ATTAACTTGC CAAGGGGAAA TTATCAGGTT
GTAGAAGTGC CGGTTCCATT TTTTACCGAC ATTGGCCGGC AATACGTTCA TAATCCAAAA
TATGCCGGGA TATTCCAAAA ACTAAAACAT ACTAGCGTCG TCCAAAGATT GAGGATGAAG
GCAGGGGCAT TTAATGGTTC GCGGATGCCC GATATACACG ATCTCTGGGC GCTGAAAGTT
GTGTCCTTCC TTAAAACAGT GCAATGGGAT GTGGTCGTTA CAACTGGTGG ACCATACAGC
GTTCATATTA TTGGTTTCTT CCTCAAGAAA CGAGGTCTAG TGCGACGATG GATAGTAGAT
TGGCGTGATT TATGGACGGA TAATCCCATA GCTGATGGCC TTCCCATACT TCGACAAATA
GAAAGAAATA TTGAAAACAC ATTTCATCGA ACATGCGATA TTATTACTAC TGTATCGCCA
CCCTTAGCTC GTATACTCAG AGAAAGTACA ACTAAACCGG TACACGTTAT CTATAACGGG
TTTGATCCTG ACGACTACTT ATCACTTCCA ACTCAGCCAA TATTTCCTGA AGATGGAATT
TTCCGTATTG TGTATACAGG TTCGATCTAT GAAAAGCGAG ATCCTCGTCC ATTATTCCGT
GCTATCAAAC AGCTTGAAGA TCAGAACATC TTGGTCAATA ATCCCCTGAA AGTTATCGTT
GCTGGATATT ACTTTCCCTT TCTTGATCTC ACTATTAAAC AGGAGAATGT CAAACAATAC
GTTGAATTCA GAGGGTTAGT TGCAAGACCT GATTCGTTAC GCATGCAACG GGATGCAGAT
GCATTATTAC TTTTGGATAT GAAAGCGGAG GGTATATTGA CCGGTAAAGT TTTTGAATAT
CTCGTTGCCG GACCACCCAT CCTCGTTGTA GGTGGAGATG CTCAATCAAG TGCCGGAGCA
CTCGTAGAAG AGTGTAAACG AGGAAGAAAC TATCAAACGG ATGTAAAAGC ACTGGCATCG
GATTTGATCC ATCTGCTTCA TGAAAAACGA CACAAAAGAG ATACAGGAAA CAAATCAATA
AATATCGCAA ATCTCGCACC GGAAATACTT CAGTTTTCAC GGGAACAACA AGCAAGGAGA
ATGCTAGATA TCATCCGAGA AATTGGAGTA TGA
 
Protein sequence
MKLKILIVTA FFPPLNMISS LRTYSWAKYW SQLGCEVTVL TTPKEPRYST INLPRGNYQV 
VEVPVPFFTD IGRQYVHNPK YAGIFQKLKH TSVVQRLRMK AGAFNGSRMP DIHDLWALKV
VSFLKTVQWD VVVTTGGPYS VHIIGFFLKK RGLVRRWIVD WRDLWTDNPI ADGLPILRQI
ERNIENTFHR TCDIITTVSP PLARILREST TKPVHVIYNG FDPDDYLSLP TQPIFPEDGI
FRIVYTGSIY EKRDPRPLFR AIKQLEDQNI LVNNPLKVIV AGYYFPFLDL TIKQENVKQY
VEFRGLVARP DSLRMQRDAD ALLLLDMKAE GILTGKVFEY LVAGPPILVV GGDAQSSAGA
LVEECKRGRN YQTDVKALAS DLIHLLHEKR HKRDTGNKSI NIANLAPEIL QFSREQQARR
MLDIIREIGV