Gene Cagg_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1972 
Symbol 
ID7268888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2409240 
End bp2410340 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID643566809 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002463302 
Protein GI219848869 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0237319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CCTTAAACAT CGTCACCATC GTCGGTGCAC GACCACAGTT CATTAAGGCC 
GCTGCCATCA GCCGCGCGTT GCGGACGCGG CACCGCGAGG TACTGGTGCA TACCGGGCAG
CACTACGATG CCAATATGTC GGCGATCTTT TTTGACGAAC TGGGTATTCC GCCACCCGAT
GTCAACCTAG CAGTCGGCTC CGCCGGTCAT GGCGCACAGA CCGGCGCAAT GCTGGCGAAG
ATTGAAGAGG TATTGCTGGC GGAACATCCG GATTGGGTGT TGGTGTATGG CGACACCAAC
TCCACGCTGG CAGGCGCGCT GGCGGCGGCA AAATTGCGCA TCCCCGTCGC CCACGTCGAA
GCCGGGCTGC GCAGTTTCAA CCGTGCTATG CCAGAAGAGA TCAACCGCGT CTTGACCGAT
CACATCTCAG ATCTGCTCCT TTGCCCAAGC CAGACCGCTA TCGACAACCT CGCGCGCGAA
GGAATCACCC GCGGCGTTAT GCTGGTCGGC GATGTGATGG CGGACGCGCT GCGGTTGGCT
GTTGAGCGCG CCGATGACTC GGCGCTGGCG GCGTTTGGCG TCCATCCGGG CAGCTATGCG
CTCGCGACCG TCCATCGTGC CGAGAACACC GATGACCCGC TTCGCTTGCA AGGTATTTTG
ACCGGTCTCA CACGACTAGA CATGCCGGTC GTCTTTCCGG TCCATCCGCG CACGCGCCGC
GCGATCGCTG CGCTCGGATG GATGCCGCCT GCACACGTGC ATCTGATCGA ACCGGTTGGT
TATCTGGACA TGATTGCGCT GATGCGTAGC TCGTGCGTTG TTCTGACCGA CTCGGGTGGG
ATCCAGAAAG AAGCGTACTG GCTCGGTGTA CCTTGTATTA CCCTGCGTGA TGAGACGGAA
TGGGTTGAGA CGGTTGAATA CGGATGGAAT ACTTTGGTCG GTGTCGATCC TGAACGGATC
GTGGCCGCTG CCCACCGGCC ACGTCCGACA ACGCCGCGCC CAATACTCTA CGGCGATGGT
CACGCCGCCG AACGGTGCGT GGCCGCGATT GAGAGAGGAT CGAAGGTTGA AGATGCAACT
GTTGAAAATA GTGGTGTGTA G
 
Protein sequence
MSKPLNIVTI VGARPQFIKA AAISRALRTR HREVLVHTGQ HYDANMSAIF FDELGIPPPD 
VNLAVGSAGH GAQTGAMLAK IEEVLLAEHP DWVLVYGDTN STLAGALAAA KLRIPVAHVE
AGLRSFNRAM PEEINRVLTD HISDLLLCPS QTAIDNLARE GITRGVMLVG DVMADALRLA
VERADDSALA AFGVHPGSYA LATVHRAENT DDPLRLQGIL TGLTRLDMPV VFPVHPRTRR
AIAALGWMPP AHVHLIEPVG YLDMIALMRS SCVVLTDSGG IQKEAYWLGV PCITLRDETE
WVETVEYGWN TLVGVDPERI VAAAHRPRPT TPRPILYGDG HAAERCVAAI ERGSKVEDAT
VENSGV