Gene Cagg_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1970 
Symbol 
ID7268886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2406713 
End bp2407930 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content65% 
IMG OID643566807 
Producthypothetical protein 
Protein accessionYP_002463300 
Protein GI219848867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0110365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTCG TGACGGCGCG GAATCTGCCG TATCCCGCCG ATCTGCCGTT TGAGGTTCCT 
TCCGAACACG TCATCGCCAC TCCTTGGGTC GATGTCAGCA TGCCTCACAC ACTCGCCACC
CGCCTCCGTC GCCATCGATC CAGCGTTGTG GCCCTATTCG ACAAAGCCCC CGCAGGACAG
ATGCAGTATA CCATTGCATC ACGCCTGCTC GATGCCTACC GCGCGCTAGT TGCGTTCCCT
GACGATGCGA TTGGCTGGTT CCCGTTCGGG TGGAACGAAG CGCAACGTCT GCTGGAGCGG
TGGCGCCCGG ATGTTATTGT TGCCAGCAGC GCTCCACCAA CGTCGCTGCT GATTGCCAAC
GTCCTGCATC GGCAGTATGG GGTGCCATGG GTCGGCGAAC TGCGCGATCT CTGGACAGAC
GATCATTACT ATCCATACTC GATGTGGCGG CGCGTGCTGG AAACGTGGCT CGAATGCCGG
ACGCTGCGCA TAGCCGCAGG GCTGGTCACC GTTTCCGAGC CGCTGGCGCG CGCTCTGCGC
TTGCGCTATA ACCTGCCGAC AGAGGTCGTG TTGAACGGGT TCGACCCCGC CGACTATCCA
CCGATGCGAC CGACGCGCGC CGATCCGCAG TTGACCATTG TGTACACCGG AGCGATCTAT
CTCAACCGGC GCGCCGCACC GCTCTTCGCC GCGCTGCAAC GCCTGGGGGC GCGCGCTGCG
CGAGTGCGTG TGACAGTCTA CAGCCACAGT ATCAGCGGCA TTGTGGCAAT CCGGTCCGAA
GCGCAGCAGT ATGGCGTCGA ACACCTGCTC GATGTCCGCG ACGCCGTTCC GCACCGCGAG
GCGCTGGCGC AGCAGCGCGC CGCCGATGTG CTGTTGCTGC TGTTGTGGAA CGACCCGCGC
GAGCGCGGCG TCTACACTGG CAAACTTTTC GAGTATCTGG GAGCGCGCCG TCCAATCCTG
GGCATCGGAC CCGCCGACAA CGTGGCGGCT GACCTGATCC GCGAGCGGCG GGCAGGGATG
GTCTCCGCCG ATCCCGCTGA GATTGCCGGG CAACTCACGC GCTGGCTGGA TGCCAAAGAG
CGCGGCGGCA TCCCAGACCT GCCGGCGTCG GCGTCCGCCG GATTGTCGCG CGAGGAGCAG
ACGCGCCGCC TGGAGGCGTT TCTGGAACGT CTCGTCGGGC AACGCGAGCT ATCGGGAGAG
CAGTCGCAGG ATGCATAA
 
Protein sequence
MRVVTARNLP YPADLPFEVP SEHVIATPWV DVSMPHTLAT RLRRHRSSVV ALFDKAPAGQ 
MQYTIASRLL DAYRALVAFP DDAIGWFPFG WNEAQRLLER WRPDVIVASS APPTSLLIAN
VLHRQYGVPW VGELRDLWTD DHYYPYSMWR RVLETWLECR TLRIAAGLVT VSEPLARALR
LRYNLPTEVV LNGFDPADYP PMRPTRADPQ LTIVYTGAIY LNRRAAPLFA ALQRLGARAA
RVRVTVYSHS ISGIVAIRSE AQQYGVEHLL DVRDAVPHRE ALAQQRAADV LLLLLWNDPR
ERGVYTGKLF EYLGARRPIL GIGPADNVAA DLIRERRAGM VSADPAEIAG QLTRWLDAKE
RGGIPDLPAS ASAGLSREEQ TRRLEAFLER LVGQRELSGE QSQDA