Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1964 |
Symbol | |
ID | 7268880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2399438 |
End bp | 2400595 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643566801 |
Product | glycosyl transferase group 1 |
Protein accession | YP_002463294 |
Protein GI | 219848861 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0014923 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATCGTA GGATTCTCAT CTTGGCCAGC TGGTATCCAA ACGCGACGTC GCCAGTGGGT GGCGTATTCA TCAAAGAACA GGCGCAAATT CTGGCAGAAC ACTTTGAGGT AACTGTTCTG GCAGTACAGA CGACAGGATT GCGCGCTACA TTACGCAATC ACTCTTACCA TGGTATCGAG CGCGACGGAA ATCTCACCAT CTATCGTGTA TATGCACCAA CCCTGCCGTA TGTGCCTCAC CTGAGTCTCC TGAGCAGCGC CTATTTTGCC TGGCAGGGAT TGCGACAATA TATTCACCAC CACGGTCGTC CTGATCTTAT TCACGCCCAC GTTGTGCTAC CGTGTGGTTG GATCGCGGCA CGCGCTGCGC AAGCGTGGGG TGTTCCGGCA ATTCTGACAG AACATACCAG TCCTTTTACC GTTCATCTAT ACACGAGATT GCAGCGGTAT TTGGTGCGTG AGACAATAAT ACATCTTCCC GTGTTGGCAA TTAGTCCGTC GCTCAGACAG CGCATTCTTG AATTTGTGCC AACTACCGAT GTGCGAGTGC TGGGTGAAGT CATCAAAACG CGCTTCTTTA CACCCTCGGA AACAGATGCC GAACCCACTC AATCCAAAAA GCGATTTCTA ACCGTTGCTC TTTTGACCGA ACAAAAGGGG GTCGATCATC TTTTACAAGC TGCTGCCTTA CTCCGTCAAC AGATTGATTG CCCGTTCGAG CTGGTCATCG GCGGCGATGG GCCAGCGCGC CCACGATTGG AACAGTTGGC TCGCCAATTC GGTCTGAAAG ATATCTGTCG TTTTGTCGGT CTCCTCAATC GGACACAGGT GCGTGATTGG ATGCGCTGGT GCGATGTGTT CATTCTGCCG AGCATTCACG AAACGTTTGG TGTCGTACTA GGTGAAGCAA TGGCATGCGG AAAACCGGTC ATTGCCACGC GTTGTGGCGG ACCGGAGTTT GTCGTTGAAG ATGGATGCGG TTTGCTCGTG CCCATTGCCG ACCCATATGC GCTTGCTGAC GCAATGAAGC AGTTTTTGCA GGACCGGGTG CAGTACGATC CATCTCTTAT TCGAGAAAGC GTTTGTCAAC GTTTTGGCGA AGAAGCGTTT TTACGAAACA TTGAGACAAT CTACAACGAA ATATGGTCAA AATCATGA
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Protein sequence | MHRRILILAS WYPNATSPVG GVFIKEQAQI LAEHFEVTVL AVQTTGLRAT LRNHSYHGIE RDGNLTIYRV YAPTLPYVPH LSLLSSAYFA WQGLRQYIHH HGRPDLIHAH VVLPCGWIAA RAAQAWGVPA ILTEHTSPFT VHLYTRLQRY LVRETIIHLP VLAISPSLRQ RILEFVPTTD VRVLGEVIKT RFFTPSETDA EPTQSKKRFL TVALLTEQKG VDHLLQAAAL LRQQIDCPFE LVIGGDGPAR PRLEQLARQF GLKDICRFVG LLNRTQVRDW MRWCDVFILP SIHETFGVVL GEAMACGKPV IATRCGGPEF VVEDGCGLLV PIADPYALAD AMKQFLQDRV QYDPSLIRES VCQRFGEEAF LRNIETIYNE IWSKS
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