Gene Cagg_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1961 
Symbol 
ID7268877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2394732 
End bp2395424 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID643566799 
Productglycosyl transferase family 2 
Protein accessionYP_002463292 
Protein GI219848859 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00401817 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00275199 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCGAC CACTTATCTC AGTAATCATC CCTTGCTACA ACGAAGCCGC AACGCTGCCA 
ACCATTCTGG CTCAAGTTGA AGCTGTTGAT CTCGACAAAG AGATCATCAT TGTGGATGAC
CATTCCACCG ATGAAACGCC GGCGATACTC GCCGAACTGG CACGTACCCG ACCGCACCTC
ACTATCATTC GCCATCCGCA AAACCGTGGC AAAGGGGCGG CGGTGCGCAG CGGCTTGGCC
CATGCCCGCG GCGAGATCAC GATTATTCAA GACGCCGATT TAGAGTACGA TCCGCAAGAC
TATTACGAGC TGGTGAAGCC AATTGCCAAT CGGCGCGTTG ATGTCGTGTT CGGCAGCCGA
TTTCTTGGCC GCCATACCGG GATGTATTTT TGGAACGCAG TTGGGAATAA GTTTCTGACG
TTCTTAACTA ATTTTCTTTA TAACTGCTGG ATCTCTGACA TGGAGACCTG CTATAAAGTG
GTGCGTACCG ACATTTTGCG GGATTTACGG CTTGAGAGCA ACGATTTTCG CATTGAGCCG
GAAATTGCCG CCAAGTTGTT GCGCCGTGGC TATCGGATCT ATGAAGTGCC GGTGAGCTAT
TTGGGTCGCA CCTACGAAGA GGGCAAGAAG ATGAAGCCCA TTCAAGGGTT TTATGCCATC
CTTGCCCTGT TGAAGTACCG GTTGGGGGTG TAA
 
Protein sequence
MNRPLISVII PCYNEAATLP TILAQVEAVD LDKEIIIVDD HSTDETPAIL AELARTRPHL 
TIIRHPQNRG KGAAVRSGLA HARGEITIIQ DADLEYDPQD YYELVKPIAN RRVDVVFGSR
FLGRHTGMYF WNAVGNKFLT FLTNFLYNCW ISDMETCYKV VRTDILRDLR LESNDFRIEP
EIAAKLLRRG YRIYEVPVSY LGRTYEEGKK MKPIQGFYAI LALLKYRLGV