| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1953 |
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| Symbol | |
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| ID | 7268869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 2384687 |
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| End bp | 2387938 |
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| Gene Length | 3252 bp |
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| Protein Length | 1083 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643566791 |
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| Product | transcriptional activator domain protein |
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| Protein accession | YP_002463284 |
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| Protein GI | 219848851 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00247822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCAACGTA GTACGTTGCT CGCGAAACTG ATCCCTACTA TCCTCATGGT ATCACAAGCG
GTTACAGGTG AGTATAACGA ACATCTGTTG CGGCCTCGTC TATTGCCACC CCCACCACCG
TTGCACCGCA TCCGTCGGGT GCGGGTTGAG CAGCGGCTGG CGGTGGCTGT CGATGTCCCA
TTGACTATTG TAGTAGCACC TCCCGGTAGT GGCAAGACGG TTGCCTTAGC CGCTCTCGCG
ACCCATGGTG GCTGGCCGGC TGCATGGTGT CGTGCCGATA CCAACGATGA TCCATCGCGC
CTGCTCGCCC ACCTTGCTGC GGCTCTGAGT CGGGTAACAT CCCTCGACCC CAATCGTCTC
CCACGAACGA TTGATGGTTT GATTAACGCG CTAACCGGCG AGCTTGATGA TGAAACGTTG
TTGATTATCG ATGATGCGCA TCTGATCGAT GAGCAGCCAG AACTACGTGC CCTTATTGAA
CGGTTTATCG TGGCTCAGCC TCCAAGATTG CATCTGGTTC TCGCCGGACG GCGCGAACCC
AATTCGCCAC TTATCGCGAC GGCTCGTTTG CGTGGTGAAG CGTTGCTGAT CGAAGCCGCC
GATTTGCTTT TTACATCCGA TGAAGCAGCT CAGCTTTGGC AGCAGGCCGG CAAAACGCTG
CCGGTTGATT TCGATGAGTT AATGACATTC AGCGCCGGAT GGCCACTCGC CCTACGGATT
GCACTCGATG CGACCGATTG GCGGAGTGCG CTTGGGCTGC GTGAACAGAA GGGTAAGCCG
GCCCTTGACG ATTATCTGGA ACGGGAAGTG TTCGCGCTGC TGCCCGAGCC GTTACAACGT
TGCCTGCAAC GCAGCGCAGG TCTGCGCTGG ATCACCCCCG ATCTGTGTGC GGCCCTCGAT
CCAACCTTCA ACGCATCTGA ACTCATTGCC GAATTACGTC GTCGCCGCCT CTTTGTCGAA
CCGTTTGGTG AGCATGGTGT CCGGTTTCAG CCGCTGATCG CGGCGTGGCT GTCCCGTCGA
GCGGCTGCCG ATCCCGAATG GGTGCATCTG CACCGCCAGG CTGCGGCATA CTTTCAGCAG
CACGGTGATC ACGAAAGTGC GTTGTACCAT CAGATTGCTG CCGGTGATCC TGCCGCAGTG
ACCACCTTCC TCCCACTGGC CCGCACGCTG CTGGCCGAGC GTCGGGCCGA AGCTGTGCTC
GATTGGATGC GACGGTTAGC GTTGACCGGC GATGAAACCC CGGAATTGAT CGAGCTTCAA
GCCGCTGCAC TTCACCAGCT CAATCGGCTT GAAGCTGCCT TGGCTACCTA CCGCCGGGCC
GAGCGGGCTT TTGCCGCGAG CGGTGATCGA CTTGGTCAGT CGCGTTGTCT ACGTGGGCAG
GCTGCAATCT ACCTTGATAC CGTTCAACCG GCTCCGGCCA CCGATTTGTT ACGCCGGGCT
TTGAAGTTGT TGCCACGTCA GTGTGGTGCG GAACGGATCG AGTTGTTGCT GATGCAGGCC
GAGAATTGGG CTAATCGCGG GCGAGCCGAT ATCGGGTTGC GACTTGAGCA GACGGCGCGT
CAGTTGGCGA AAGCCCACGG GCTGTCCGCG CAGTACGATC CGCAGGCTGA AGTGCTCCGG
CCACGCTTGC TGTTGCGGGC CGGACGTCTG CGGGAAGCAC GGCAGTTGCT CGAAGAACGG
CTTTGGTCCG AACAGTCATG TACGCGAGCA ACAGGCCATC GTGAACCGCT TTTACTGCTG
GCGCTGATCA ACGCAATGCT TGGCGTGGGG CCACAAGCGC TAGCGTTTGC CCATCGAATG
TTGATCGAAG CGCAACAGAG CGGCAATTTG GTTACGGAAG CCCTGGCCGA GTTGCGGCTT
GGTCATGCCT ATCAGCTTAT CGCTCGTGGT GATGATCAAG CGGCGCTCCA ACACTATAGC
CGTGGTTTGC GTCTGTTGCA GCAGGTGACA GTGCCGCGAA CTCGTGCCGA GGGGTATCTG
GGCCTGACGC TCCTTCATGG TCATGCCGGC GATTTGGCCC GTGCCGAGGC CGATGCTCGC
GAGGGTCTGT TGCTGGCCGC TTCTGCCGGC GATGAGTGGG TCGCTGCCCT GATGTTGCTC
GCCCTCGGCA GTGTTACCCT TGTAGCCGAT GATCCGCGCG GTTACGAGTG GCTCGATCAG
GCCGAACAGC GATTTCAAGC CGGTCGTGAT ACCTTTGGCT TGTTTCTGGT GCATCTCTGG
CGAGCATTGG CAGCCTTGCG CGTCGGTCGG ACTGCTGCGG TCGATCCGTT GGTCGATCAG
GTCATGCACG AAGCGGTGGA GTATGGCTAC GAGCATGTCT TGATCGGACC GAGTCTGTTT
GGGCCGCGCG ATATTGCGGC GTTGGTGCCT TTGCTTCTAC GCGCCCGCAC GATGCCGGCC
CACCGCGATA CTGCTATTCG GCTGCTGCGG CAGGGTTTTC CCTCGATCGC CACCGATGAC
ACCGTTGATG ATTACCATCC CGGCTTTACA CTACGGGTGC AAATGTTGGG AGCATTCCGG
GTTTGGCGAG GTAATCAAGA GATTCAAGCT CGTGAGTGGC AGCGTGAAAA GGCGCGTCAG
CTTTTCCAGT TGCTGCTGAC GATGCGTGGT AATTGGGTAC AACGCGAGCA GATCTGCGCA
TGGCTGTGGC CTGATGCCGA TCTCGAAGCT GCCGAACGCC AGTTTAAGGT AACTTTGAAC
ACGCTTAACG CAGCGCTTGA GCCACACCGT CCGCCGCGCG TACCCCCGTT CTTTATCCGT
CGGCAGGGGT TGGCGTATAG CTTTGCCCCT TCCTTCGGCG TATGGATCGA TGTTGACGAA
TTTGAACTGC GTGCCAGTAG TGCATTGACG GCAACCGACC CCGATTTTGC GCGCCGCAGC
GCCCAAGCTG CGCTCCAACT CTACCGCGGT GATTATCTCG CCGAATCGCT GTATGATCCG
TGGACAACCG AAGAGCGTGA GCGTTTGTTG GCCCGTTATC TGGCAACGGC TGTTGCCTAT
GCCGAACGAC TGAGTGCCGA AGGAAAGCAC AACGAGGCGA TCCAGATCGC CGAACAGGTG
TTGCGTCGCG ATCGCTGTTA CGAGGAAGCC TACCAATTGC TGATGCGTGC CCATGCCCGC
GCCGGCAGCC GTTCGCAGGC GATGCGCGCC TATACACGTT GTGTCCAGGC GTTACGTGAG
GAATTAGGGA TTGAGCCGTT GGCTGAAACG GAAGCGCTCT ACCTGCGTAT CCGCTTGAAT
GAGCCGATTT GA
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| Protein sequence | MQRSTLLAKL IPTILMVSQA VTGEYNEHLL RPRLLPPPPP LHRIRRVRVE QRLAVAVDVP
LTIVVAPPGS GKTVALAALA THGGWPAAWC RADTNDDPSR LLAHLAAALS RVTSLDPNRL
PRTIDGLINA LTGELDDETL LIIDDAHLID EQPELRALIE RFIVAQPPRL HLVLAGRREP
NSPLIATARL RGEALLIEAA DLLFTSDEAA QLWQQAGKTL PVDFDELMTF SAGWPLALRI
ALDATDWRSA LGLREQKGKP ALDDYLEREV FALLPEPLQR CLQRSAGLRW ITPDLCAALD
PTFNASELIA ELRRRRLFVE PFGEHGVRFQ PLIAAWLSRR AAADPEWVHL HRQAAAYFQQ
HGDHESALYH QIAAGDPAAV TTFLPLARTL LAERRAEAVL DWMRRLALTG DETPELIELQ
AAALHQLNRL EAALATYRRA ERAFAASGDR LGQSRCLRGQ AAIYLDTVQP APATDLLRRA
LKLLPRQCGA ERIELLLMQA ENWANRGRAD IGLRLEQTAR QLAKAHGLSA QYDPQAEVLR
PRLLLRAGRL REARQLLEER LWSEQSCTRA TGHREPLLLL ALINAMLGVG PQALAFAHRM
LIEAQQSGNL VTEALAELRL GHAYQLIARG DDQAALQHYS RGLRLLQQVT VPRTRAEGYL
GLTLLHGHAG DLARAEADAR EGLLLAASAG DEWVAALMLL ALGSVTLVAD DPRGYEWLDQ
AEQRFQAGRD TFGLFLVHLW RALAALRVGR TAAVDPLVDQ VMHEAVEYGY EHVLIGPSLF
GPRDIAALVP LLLRARTMPA HRDTAIRLLR QGFPSIATDD TVDDYHPGFT LRVQMLGAFR
VWRGNQEIQA REWQREKARQ LFQLLLTMRG NWVQREQICA WLWPDADLEA AERQFKVTLN
TLNAALEPHR PPRVPPFFIR RQGLAYSFAP SFGVWIDVDE FELRASSALT ATDPDFARRS
AQAALQLYRG DYLAESLYDP WTTEERERLL ARYLATAVAY AERLSAEGKH NEAIQIAEQV
LRRDRCYEEA YQLLMRAHAR AGSRSQAMRA YTRCVQALRE ELGIEPLAET EALYLRIRLN
EPI
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