| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1936 |
|---|
| Symbol | |
|---|
| ID | 7268852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2370057 |
|---|
| End bp | 2371895 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643566774 |
|---|
| Product | DNA mismatch repair protein MutL |
|---|
| Protein accession | YP_002463267 |
|---|
| Protein GI | 219848834 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000687656 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCC GTCTGCTCGA TGAAACGATT GCTGCCCAGA TTGCTGCCGG CGAAGTGGTC
GAACGTCCGG CTTCCGTTGC CAAGGAGCTG GTCGAGAATG CACTCGATGC CGGTGCGCGC
CGGATTGTGG TCGAGGTGCG GGGTGGTGGG CTGCGTGAAA TTCGTGTGCA AGATGATGGC
TGTGGTATTT CTGCCGAGGA GGTTGAGTTG GCATTTGCTC GTCATGCGAC GAGTAAGTTG
CACTCTGCCG ACGATTTGTG GGCCATTCGC ACGCTTGGTT TTCGTGGTGA GGCGTTGCCG
AGCATTGCGA GCGTTGCCCA GGTGATCTGT GTGACCCGCG TCGCCGATGC CGAGTTGGGG
GTTGAACTGC GGATCGCCGG TGGTGAGGTG CAGTCACGTT TGCCGTGTGG TTGCCCTGCC
GGCACGACGA TTACGGTGCG CAATCTGTTC TACAATACGC CGGTGCGGCG CGAGTATCTC
CGTTCGGAAG CTACCGAAAC CGGTGCCATC AGTGCAATCG TTCAGCAGTA CGCTCTTGCC
TACCCAGAAG TGAGTTTTAG CCTCGTGATC GATGGGCGGT TGGCATTTCA AACGACCGGT
GATGGCGATT TGCGCGCGGT GGTAGTTGAG CTGTACGGTC TTGCGGTCGG GCGAGCCTTG
TTGCCGGTGC AGGCCGAAGT CGGTGATGGT GAATTGTGGG TGGCAGTGAA CGGTCTGATC
TCGCCGCCCG ACCTGACCCG TAGTTCGCGA AGTTATCTCT CGTTCTTTGC TAATCGGCGC
GCATTGCAAC CGCGCGGGGC CTTGGCGGCT GTGGTAGAGA ATGCGTACCA TACGATGCTG
ATGAAGGGTC GTTTCCCCAT CGCGATTATC GATCTGCGCG TGCATCCTGC TGCCATCGAT
GTGAATGTTC ATCCAACCAA GAGCGAAGTC AAGTTTCGCT ATCCGGCCCA TGTCCATAGT
GTGTTGGGGC AGGCAATTCG CGATGCGCTG ATCAAGGGGA GCGATATTCC GGTGTGGGAA
GCTCCCGATC CGGCGACAGC TCAGCGTCGA TTTGAGCTGC GTCGTCTTGG TCAGGAACAG
GCAAGCTCAC CGGCAACCTG GGGAGTAGGT GCTCAAGCAT GGGATCGGGA ACGCGCGCAC
TGGGATGTCG GTACACCGGT TTCGCGATCT GAGCCGTCGT TGCTGGTGTC ACCGGTTGCA
GTACCCACGT CGAATACTGC TGTACCTACA CCAGATGCTT CATTTGCAAC CTCATCATCG
GCCTTACCAC CGTTGCGCGT GGTGGGGCAA GTTGGGTTGA CGTATATCGT GGCGGAAGCA
CCAGAGGGGA TGTATCTGAT CGATCAGCAC GCTGCCCACG AGCGAATTAC CTATGAGAAG
TTGATGAATC AGTACGCTCA ACGTGCAGTT GAGTCGCAGC AGTTGCTGAT TCCGCAAGCG
GTTGAGTTAA GCCCGGAAGC GAGCACACTT TTGGTAGGTA ATGCCGAGAA GTTGGCCGAA
TGGGGGTTTG CGCTGGAGCC TTGGGGAACC GGAGTGTTGG TGCGGGCGAT ACCGGCTACT
CTGCCACCCG ACGAGCTAAC ACAGGCGTTG CACGAGGTAG CCGAGCGGCT GGCCGGGCGC
GGTGGGAGTA GTCCGCTCGA GTGGCGTGAA GCGATGTTGA TTACGTTGGC CTGCCACACT
TCGGTGCGCG CCGGCCAACC GCTCTCGCAC GACGAGATGC GTCATCTGCT CCGCCAACTT
GAACAGTGTG TAAGCCCGCG CACGTGTCCG CATGGTCGCC CGACTATGAT CCTGATGACA
CCGGCTCAGC TCGAACGGCA GTTTGGTCGG CGCGTGTAA
|
|---|
| Protein sequence | MPIRLLDETI AAQIAAGEVV ERPASVAKEL VENALDAGAR RIVVEVRGGG LREIRVQDDG
CGISAEEVEL AFARHATSKL HSADDLWAIR TLGFRGEALP SIASVAQVIC VTRVADAELG
VELRIAGGEV QSRLPCGCPA GTTITVRNLF YNTPVRREYL RSEATETGAI SAIVQQYALA
YPEVSFSLVI DGRLAFQTTG DGDLRAVVVE LYGLAVGRAL LPVQAEVGDG ELWVAVNGLI
SPPDLTRSSR SYLSFFANRR ALQPRGALAA VVENAYHTML MKGRFPIAII DLRVHPAAID
VNVHPTKSEV KFRYPAHVHS VLGQAIRDAL IKGSDIPVWE APDPATAQRR FELRRLGQEQ
ASSPATWGVG AQAWDRERAH WDVGTPVSRS EPSLLVSPVA VPTSNTAVPT PDASFATSSS
ALPPLRVVGQ VGLTYIVAEA PEGMYLIDQH AAHERITYEK LMNQYAQRAV ESQQLLIPQA
VELSPEASTL LVGNAEKLAE WGFALEPWGT GVLVRAIPAT LPPDELTQAL HEVAERLAGR
GGSSPLEWRE AMLITLACHT SVRAGQPLSH DEMRHLLRQL EQCVSPRTCP HGRPTMILMT
PAQLERQFGR RV
|
|---|
| |