Gene Cagg_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1931 
Symbol 
ID7268846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2363214 
End bp2363933 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID643566768 
Producthypothetical protein 
Protein accessionYP_002463262 
Protein GI219848829 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.932941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000192623 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACCAAC GCAATCGGTC CAACCCGAAC AGCGATCAAC GCGCCGTGAG CATGTTACCA 
ACCCTCGTGA TGATGGCCCG GCGCCCTGAA CCAGGTCGCG TCAATACACG CCTGTGTCCA
CCGTTGACGG CAACACAGGC TGCATCGCTG TATGAACTGT TTTTGCGCGA TTTGGTGGCG
ATGATGCGCA CTGTACCAAA CACACGATCG CTGATTGCCT ACGCCCCCAC CGATGCCGCC
GAGTACTTTG CAGCTCTTGC GCCCGACATC GCCCGTCGCC CTCAGATTGG TCGTGATCTA
GGTGAGCGCC TGGCAGCAAT CACCACTGAG CTGTTAGCAG AAGGTACATC GGCAGTCGTG
GTCATCGGCA GCGATAGCCC CAGCCTACCA CCAACCTTGA TCGGGCAAGC CTTGGCCGAG
CTTGAACGCG GCGCCGATCT GGTCTTGGGG CCGGCAGACG ATGGTGGCTA CTATCTGGTC
GGCTTGCGCC GGATTGCTCC ATCTCTTTTC ACCGAGGTGA TCATGAGCAC GCCCACCGTC
CTGCGCGATA CCCTTGCTGT CGCCGAACGG CTGGGTTTAG GCGCAGCCCT GATCGAACCG
TGGTACGACA TCGATACTAT CGCCGATCTC CATCGGTTGC GCGCCGATCC AGCTCCGCTG
CCGTACAGCC GACCGCTGCT TGAGACGTTG TTGCGTAATC TGTACCCAAA ACACCCATAA
 
Protein sequence
MHQRNRSNPN SDQRAVSMLP TLVMMARRPE PGRVNTRLCP PLTATQAASL YELFLRDLVA 
MMRTVPNTRS LIAYAPTDAA EYFAALAPDI ARRPQIGRDL GERLAAITTE LLAEGTSAVV
VIGSDSPSLP PTLIGQALAE LERGADLVLG PADDGGYYLV GLRRIAPSLF TEVIMSTPTV
LRDTLAVAER LGLGAALIEP WYDIDTIADL HRLRADPAPL PYSRPLLETL LRNLYPKHP