Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1931 |
Symbol | |
ID | 7268846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2363214 |
End bp | 2363933 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643566768 |
Product | hypothetical protein |
Protein accession | YP_002463262 |
Protein GI | 219848829 |
COG category | [S] Function unknown |
COG ID | [COG3222] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.932941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000192623 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCACCAAC GCAATCGGTC CAACCCGAAC AGCGATCAAC GCGCCGTGAG CATGTTACCA ACCCTCGTGA TGATGGCCCG GCGCCCTGAA CCAGGTCGCG TCAATACACG CCTGTGTCCA CCGTTGACGG CAACACAGGC TGCATCGCTG TATGAACTGT TTTTGCGCGA TTTGGTGGCG ATGATGCGCA CTGTACCAAA CACACGATCG CTGATTGCCT ACGCCCCCAC CGATGCCGCC GAGTACTTTG CAGCTCTTGC GCCCGACATC GCCCGTCGCC CTCAGATTGG TCGTGATCTA GGTGAGCGCC TGGCAGCAAT CACCACTGAG CTGTTAGCAG AAGGTACATC GGCAGTCGTG GTCATCGGCA GCGATAGCCC CAGCCTACCA CCAACCTTGA TCGGGCAAGC CTTGGCCGAG CTTGAACGCG GCGCCGATCT GGTCTTGGGG CCGGCAGACG ATGGTGGCTA CTATCTGGTC GGCTTGCGCC GGATTGCTCC ATCTCTTTTC ACCGAGGTGA TCATGAGCAC GCCCACCGTC CTGCGCGATA CCCTTGCTGT CGCCGAACGG CTGGGTTTAG GCGCAGCCCT GATCGAACCG TGGTACGACA TCGATACTAT CGCCGATCTC CATCGGTTGC GCGCCGATCC AGCTCCGCTG CCGTACAGCC GACCGCTGCT TGAGACGTTG TTGCGTAATC TGTACCCAAA ACACCCATAA
|
Protein sequence | MHQRNRSNPN SDQRAVSMLP TLVMMARRPE PGRVNTRLCP PLTATQAASL YELFLRDLVA MMRTVPNTRS LIAYAPTDAA EYFAALAPDI ARRPQIGRDL GERLAAITTE LLAEGTSAVV VIGSDSPSLP PTLIGQALAE LERGADLVLG PADDGGYYLV GLRRIAPSLF TEVIMSTPTV LRDTLAVAER LGLGAALIEP WYDIDTIADL HRLRADPAPL PYSRPLLETL LRNLYPKHP
|
| |