| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1929 |
|---|
| Symbol | |
|---|
| ID | 7268844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2361253 |
|---|
| End bp | 2362521 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643566766 |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | YP_002463260 |
|---|
| Protein GI | 219848827 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00455399 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000256479 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAATATC TCATCGATCA GGTCATGCCG AATATGTCAA CGTTACCATC TCAATCTAGC
CCACGGATGG GTGAATTTAT CGCGATGATG GCACTGATGA CTTCGCTGGT GGCGATGTCG
ATTGATCTGA TGTTACCGGC ACTGAGTAGT ATCGGGCACG AACTCGGCGC ACCTCACGCC
AATGCCAATC AGTTGGTGGT AACGATGGTG TTTGTCGGCT TAGCGATCGG CCAACTGCTC
TACGGTCCGC TCTCTGACAG CATTGGCCGC AAAGCCGCCA TCTATCTCGG CTTTACCGTC
TTCATTATCG GCTCTGTGCT CACCATAATC GCTATCAACT TTCCGATGAT GCTGGCCGGT
CGCCTGTTAC AAGGTCTAGG CGTGGCCGGG CCACGAGGCG TCTCGATGGC CCTGATTCGG
GACCGTTTCA GCGGGCGAGC AATGGCGCGG GTGATGTCGT TCATTATGGT CGTGTTCATC
ATTGTACCGA TCATCGCGCC GGCAGTAGGT CAGGCTATCC TGCTTGTAGC GGCTTGGCGG
ATGCTCTTCG TCACGCTCCT CGTGTTAGGT ATTGTTTCGT TGCTCTGGTT TGGTCTGCGC
CAACCGGAAA CACTACCGGC AGCCCAACGG ACACCGCTAT CGCCGCAGCG AATTGGCCGA
GCATTTCGCG AAGTGGTGAG TCACCCGATA GCGCTTGGGT ATACGTTAAT GGCCGGCGTG
ATTTCGGCGA TTCTCCAAAG TTATCTAAGC TCTGCCCAGC AGATTTTCCA AGAACAGTAC
GCTTTAGGGA CCCTCTTCCC GTTGTTTTTT GCCGGGAACG CGCTGGCCAT CGGCTTAGCA
TCATTCGTCA ACGGACGGTT AGTGATGCGT TACGGGATGC GCTCGCTCAT CGGCAATGCC
TTGCTCGTCC TGATCGGGCT GACGATCACG CTGGCAGGCA TTGCCGTGGT GACGCATGGT
CAACCCTCGC TCTGGGTATT GATGGCAGCA CTGATGCCGA GTTTCTTTTG CCTTGGTATT
TTGTTTGGCA ATATGAATGC GATGGCGATG GAACCACTCG GTCATGTTGC CGGTACCGGC
GCTGCGGTGG TCGGCTCACT CTCGACGTTT GTGGCCATTC CGATTGCCAC CATCATCGGA
CAGGCCTATA ACGGTACGAT TACCCCGCTG GCATTGGGTT TTGCGGTCCT GGCGTTGAGT
GCATTTGGCC TGATGCGGTG GGCTGATGGT CGGCAACATC GGGTGGTCGA TCCCGAATCG
GTGGCGTGA
|
|---|
| Protein sequence | MQYLIDQVMP NMSTLPSQSS PRMGEFIAMM ALMTSLVAMS IDLMLPALSS IGHELGAPHA
NANQLVVTMV FVGLAIGQLL YGPLSDSIGR KAAIYLGFTV FIIGSVLTII AINFPMMLAG
RLLQGLGVAG PRGVSMALIR DRFSGRAMAR VMSFIMVVFI IVPIIAPAVG QAILLVAAWR
MLFVTLLVLG IVSLLWFGLR QPETLPAAQR TPLSPQRIGR AFREVVSHPI ALGYTLMAGV
ISAILQSYLS SAQQIFQEQY ALGTLFPLFF AGNALAIGLA SFVNGRLVMR YGMRSLIGNA
LLVLIGLTIT LAGIAVVTHG QPSLWVLMAA LMPSFFCLGI LFGNMNAMAM EPLGHVAGTG
AAVVGSLSTF VAIPIATIIG QAYNGTITPL ALGFAVLALS AFGLMRWADG RQHRVVDPES
VA
|
|---|
| |