Gene Cagg_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1924 
Symbol 
ID7268839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2356958 
End bp2357962 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID643566761 
Productprotein of unknown function DUF88 
Protein accessionYP_002463255 
Protein GI219848822 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000499479 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000129019 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAATCT ACGCACGTCG CCTTGCTACT ACCGGAGCCA CCGCACCCCG ATCAACTACC 
GCACCTCGCC GCATTGCCCT CTTGATCGAT GGTGAAAACT GTGCTGCCAC TTACGCCGAC
CAAGTGATGG AAATGGCTGA CAAGCAAGGC ATATTGGTCA CACGCCGTGT CTACGCCAAC
TGGTCAGTCT CTGCCCACCA AAAATGGATT GAAGCAGTCG CACGCTACGA TTTGCGTCCG
ATTTACTATG CAGGGATAGC TCCGGGTAAA AGTACCATCG ACATGGTACT GACTATTGAT
GCAATGGATC TGCATTACCG GCAAGTGTGC GATGATTTCT GTTTAGTAAC CGGTGACGGC
GACTATGCGC CGCTGGTCAA ACGACTCCGA GCCGGCGGCG CTAACGTGAT TGTGATAGGG
ACGGAACAGA CGGCAACCGT CTTGAAAGAG GTATGCAGTA CGTTCATCCC CTTGGCGAAA
CCCAACACCG GCACATCATC TGTTCCTCCG TCCGTTGTCA CGGAAAGAGA GCAAACCACC
CAAAGTTCTA ACACGCCTGC ACCGACCCCC ATCAGCGCAA TCGAATCGAC AACTACAGTG
AGGAGCAGTT CACCAACAAC CTCAGCAGTT ACCAACGGCG ATTCACCCAT TCCCCAACCA
ACGGCCCAGT CCACCAACCA ACCTCAACTC AATAGCCAGG TGGTGATAAC GAGACCGCTA
CGCGATGCCG TGAAACTCCT CCAACGCATA CTGACCGAAT CGGCGCAAAC TGCTCCCGGT
GAATGGGTTA GTGGGAGCGC CATCGGTTCA CGCCTCCGTG CTATCGATCC CAGTTTTGAC
CACCGATTCT ACGGTTATCA GAACCTATCG AAATTATTGG ACGCTTGTGT TGTAGAAGCA
AAAGAGATGT TTGAGATACG CAGGCGCGAC AATGGAAATA TTGACATCCG CCTCAAACCG
AGCAATTCTA AGTCGGCTAA CGAGACAGGA CAAGCAGCCG GATGA
 
Protein sequence
MAIYARRLAT TGATAPRSTT APRRIALLID GENCAATYAD QVMEMADKQG ILVTRRVYAN 
WSVSAHQKWI EAVARYDLRP IYYAGIAPGK STIDMVLTID AMDLHYRQVC DDFCLVTGDG
DYAPLVKRLR AGGANVIVIG TEQTATVLKE VCSTFIPLAK PNTGTSSVPP SVVTEREQTT
QSSNTPAPTP ISAIESTTTV RSSSPTTSAV TNGDSPIPQP TAQSTNQPQL NSQVVITRPL
RDAVKLLQRI LTESAQTAPG EWVSGSAIGS RLRAIDPSFD HRFYGYQNLS KLLDACVVEA
KEMFEIRRRD NGNIDIRLKP SNSKSANETG QAAG