| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1908 |
|---|
| Symbol | |
|---|
| ID | 7266399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2338356 |
|---|
| End bp | 2339912 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643566745 |
|---|
| Product | adenylate/guanylate cyclase with GAF sensor and FHA domain |
|---|
| Protein accession | YP_002463239 |
|---|
| Protein GI | 219848806 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.136997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.266082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGA TTACGGTCAC CATCCACGGC GAGCAACGCT CGTTCCCAGT TACCGAGCAG
GGTATCACCA TTGGCCGTCA ACTCGATAAT GAAATTGTGC TGAACCATGC GATTGTTTCG
CGGAAGCATG CCCGTATCGA GCTGCGTGGT CGGCGGGCTT GGGTCATCGA CTTGAACAGT
CGCAATGGCG TGACGGTCAA CCGCTTGCGG GTGAAAGAAG AGCTGCTCAA CGATGGTGAT
GTTATCGGGA TCGGCCCTTT TGAGCTGATC TTTGAAGACC GTGCCGCCCA GAGTATCGTA
CTCGACGATA ATCGCTACTT CCCTGTTACC TCGGAGTCGC AATCGGTTGC GGCCCACGCC
CTCCAATTAC AGCCATCTGA TCTGCAAGCG TTTTATCAGA TCAGTATGCG GATCAATCAA
GCCCTCGATT ACCGCGAGCT GCTCGATTTG GTGATGGAGG AGATTATCCG GTTGGTACCG
GCACAACGTG GGTTTTTGCT GCTGCGTAAA GGCGATGAGT TAGTACCGCG CGTGATTTTG
CCGCCCAGTA CCGGTGATGT GGTGATTGCC GGCAGTATTG TGCGCAAAGC CATCGAGCGT
GGTGAAGCCG TGCTGACCCA CGATGCGCGC CTCGAATTTG CCGGTTCCAA GAGTATTATC
GCCGCTAACA TCCGCTCGGC ACTCTGTGCG CCCTTATTGA CCCAAGTCGG TGCGATTGGG
GTGATCTTGC TCGATTCACC CGGTCGTGAG CAGTTTACGG CGCGCGACCG CGATCTCGTG
GTGGCAATCG CCAATCTCGC AGCAGTCGCA ATCGAGCGGG CACGCCTTAC CGAGGAGCTG
CGCGTGCAGG GCCAGGTACG ACAAAACCTC GAACGCTTCC TTTCGCCAAA CGTAGCCCAC
GCTCTGGCAC GCTACGTTGC CCAACACGGA AAGCTATGGG AAGCACAAGA GCAGATCGTT
ACCGTTCTTT TTGCCGATGT GAAAGGCTTT ACCTCCCTCT CCGAACGGTT GTCGCCGCGC
GAGGTGCAAG ATTTGCTCAA TGAGTATTTG CACGAAATGA CCGAGGTGAT TTTCCGTTAC
AATGGCACCG TCGATAAGTA TATCGGCGAT GGGATTATGG CTATCTTTGG TGCGCCGCGC
TTGCCCGATG ACTCGCCCGA TGAGCAGCAC GCCTTGCGCG CTGTGGCTGC GGCTGTGGAG
ATGTTGCAAG CCCAACAACG ATTGGTCAGT CGCCTCGAAC CTGATAAGGC GTTCACCATT
CGGATAGGCG TCAATACCGG ACCGGCGTAT ACCGGCTTTT TCGGCACACG TCACCGGTTG
GAATACACGG CCATCGGCGA TACCGTCAAT ACTGCGTCAC GGCTGGAGAC GGCTGCCGAA
CCGGGGACGG TGTTTATCGG TGAAGATACG GCCCGCCTGG TCCGCGATCA GTTTGACTTG
CAAGAGATGG GGGAGCTACA GTTGAAGGGT AAGCAACAGC GAGTGCGAGC GTATAAAGTG
CTTGGCCCAC GTGCTAAACC CGATGGGGCG GCAACGATCG TGTACACCGG CCCCTGA
|
|---|
| Protein sequence | MARITVTIHG EQRSFPVTEQ GITIGRQLDN EIVLNHAIVS RKHARIELRG RRAWVIDLNS
RNGVTVNRLR VKEELLNDGD VIGIGPFELI FEDRAAQSIV LDDNRYFPVT SESQSVAAHA
LQLQPSDLQA FYQISMRINQ ALDYRELLDL VMEEIIRLVP AQRGFLLLRK GDELVPRVIL
PPSTGDVVIA GSIVRKAIER GEAVLTHDAR LEFAGSKSII AANIRSALCA PLLTQVGAIG
VILLDSPGRE QFTARDRDLV VAIANLAAVA IERARLTEEL RVQGQVRQNL ERFLSPNVAH
ALARYVAQHG KLWEAQEQIV TVLFADVKGF TSLSERLSPR EVQDLLNEYL HEMTEVIFRY
NGTVDKYIGD GIMAIFGAPR LPDDSPDEQH ALRAVAAAVE MLQAQQRLVS RLEPDKAFTI
RIGVNTGPAY TGFFGTRHRL EYTAIGDTVN TASRLETAAE PGTVFIGEDT ARLVRDQFDL
QEMGELQLKG KQQRVRAYKV LGPRAKPDGA ATIVYTGP
|
|---|
| |