Gene Cagg_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1907 
Symbol 
ID7266398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2337620 
End bp2338333 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID643566744 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_002463238 
Protein GI219848805 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000908776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.33378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATT CCCACTCTGT TGCACCATTA CGTCGTCGGC AGACGAGCAC TGCCGGCGAA 
CCAACCGCGA AAGAACGCGA ATACCTTGAG GTCATTTACT ATCTCGCTGC GCGTAACGAA
CCGGTCATTG CGGCTCGTTT GGCGCGCTGG ATGAAGGTGC AGCCGCCAAC GGTTACCCAT
ATTGTTGCCC GCCTGCTTGA AAAAGGATTC ATTGAACGCA ATGCCCATGG CGAGATTACC
CTGACCCCTA CCGGTCTCAA ACTAGCCGAA GAGATGGTAC GTCGGCATCG AATCCTCGAA
CGATTCCTCG TTGATGTTAT GGGATTACCG TGGCACCTGA TTCACGAGGA AGCAGTGCGA
CTCGAGCACG CTCTTTCGCC GGTGATGGAA GAACGCATTA TGGCACTGGT TGGGCATGCC
ACGACGTGTC CGCACGGTAA TCCGATTCCC GGCCAGTGTG ATGTCTACGC CGGCGCGGCC
CGGCTCGACA CGACCCAAGC CGGGCAGTCA TTTATGATTC GGCGCATTGC CGAAGAGGCT
GAGGAAGAGA CACCGATTGT CGCCTTTCTC GAAGCGAATG GGTTGGTACC GGGGGCCGAA
TTCGTCATTG CCGATAATAT CCCCTCTATC GGTGTGACGT TGCAACGACC GGGTTTGTCG
ATTACCGTAC CGGCTCATAT CGCCGAACTG ATTTGGGGAG ACATCGCCGG TTAG
 
Protein sequence
MNNSHSVAPL RRRQTSTAGE PTAKEREYLE VIYYLAARNE PVIAARLARW MKVQPPTVTH 
IVARLLEKGF IERNAHGEIT LTPTGLKLAE EMVRRHRILE RFLVDVMGLP WHLIHEEAVR
LEHALSPVME ERIMALVGHA TTCPHGNPIP GQCDVYAGAA RLDTTQAGQS FMIRRIAEEA
EEETPIVAFL EANGLVPGAE FVIADNIPSI GVTLQRPGLS ITVPAHIAEL IWGDIAG