| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1902 |
|---|
| Symbol | |
|---|
| ID | 7266393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2333616 |
|---|
| End bp | 2334668 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643566739 |
|---|
| Product | sortase family protein |
|---|
| Protein accession | YP_002463233 |
|---|
| Protein GI | 219848800 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
|---|
| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0102426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.943943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGAT TACTTATCCT TTGTCTGATA GTATTGCTTC TTAGCCCGTT ACCGGTCGCT
GCCAATACGG CTGCCGGTCA ACCGACCGTC TTCCGTGAGA CCGGTCATAC GTTGGCATAT
GCCTTTCGTG AATTCTACGA CCGGCAAGGT GGTCTACCGA TTTTTGGCTA TCCACTCACC
GAGGTGTTTA TTGAAGATGG CCGTCCGGTG CAGTATTTCG AGCGTGCCCG CTTCGAGTGG
CACGCCGATT TGGCGTTGGT GCAGGTCGGG CATCTTGGGC GATGGGCGGC AACGGCGTAT
GTCGATCATC CGGCGTTTGT ACCATTACCG ACAGCTCCGG CAAATGCCGA TTTCTTTCCC
GAAACCGGTC ATAGTCTGAG TGGGGCTTTT CGTACTTTCT GGTGGCAAAA CGGTGGGTTG
CCGACGTTCG GTTTCCCGCT ATCAGAACCG TTTGAGACCG TCGATGAGAA TGGTCAGCCG
CGTGTGGTCC AGTTCTTTGA GCGGGCACGC TTTGAGTGGC ATCCGCAGAA CCCACCCCGC
TACCAGGTGC TGCTCGGACA TTTGGGACGG GCATGGTTGG CCGCACATCC GGTGCCGGAA
TGGTCACTAC AACCGGTGAC AAGCGGTGAT GCTGCGTGGG CTGCGGTTCG TCCGACGCGC
GTGCGGGTAC CCCGCATCGG TGTCGATACC GAGGTTGTCA GTGCGGGATT TTCGTTTGGG
GTGTGGGACG TTCCACGCTA TACGGCCGTC CACTACTGGC CGATCAGTGG CTATCCCGGC
ACAACCGGCA ATATCGTGAT TGCCGGCCAT GTTGGGTATC GTGGAATTAT TTTCAATCAG
CTACCGGCAA TTACGGTCGG CGATGAAGTA TTGGTCACGG TGAACGGTAA CGACCGTCGC
TATGTGGTGC GTGAGGTTTT GACGGTGCTT CCCGATGCGA CGTGGGTGCT CGCACCGACA
AGCAGCGAAA CGCTCACGCT GATTACCTGT GTACCGATTG GAGTCTATTC CCATCGGCTC
ATTGTGCGTG CCACACCGGT GACCGATTCG TAA
|
|---|
| Protein sequence | MRRLLILCLI VLLLSPLPVA ANTAAGQPTV FRETGHTLAY AFREFYDRQG GLPIFGYPLT
EVFIEDGRPV QYFERARFEW HADLALVQVG HLGRWAATAY VDHPAFVPLP TAPANADFFP
ETGHSLSGAF RTFWWQNGGL PTFGFPLSEP FETVDENGQP RVVQFFERAR FEWHPQNPPR
YQVLLGHLGR AWLAAHPVPE WSLQPVTSGD AAWAAVRPTR VRVPRIGVDT EVVSAGFSFG
VWDVPRYTAV HYWPISGYPG TTGNIVIAGH VGYRGIIFNQ LPAITVGDEV LVTVNGNDRR
YVVREVLTVL PDATWVLAPT SSETLTLITC VPIGVYSHRL IVRATPVTDS
|
|---|
| |