Gene Cagg_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1879 
Symbol 
ID7266370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2301302 
End bp2303950 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content56% 
IMG OID643566716 
Producthypothetical protein 
Protein accessionYP_002463210 
Protein GI219848777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.617309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGTT TTCTGCTCTA CTGGCTCACC CTTGCCGCCA TACTCACCGG AGCTGCGCCG 
ATCACTTCGG CGCAGCCTTC AGTACAGCTT ACCTTCCATC CCTCTGCCAA CGGGATTGAA
GTCGTCTGGG TTGGTTCCGA ACAGTCCACT CCACAACGTT TCTGGTTGTA CCTATCAGCC
GATACATCGG CGACACCTAT CCTGCGTTCT GTGACCGATC AACCGTTGCG CGAACCGTTA
CCTTCACCCG CCCTACCGGT GCAAACGTTC GCCGGTGAGA CCTACCCACC CTTGCCCCAA
TTCTTGCCTA CAGTACCCCA ATCACCATTA CGTCTGGTGA GCGAAGGATA CCAGCGCGGA
GTACGGATAG CCCTTTACGA GATTGCTCCC CGTTATCTTG CCGATACCGG GCCGCGTCAA
GCACTGCGAT TGACAGCATT TATTGCCGGT GCATCACTGA CACCGCCAAC GACCAGGCCA
TCGCCACAAC TTGCCGGTGT GCCATCTCCT GATCCGCTCG CCGCTCGTCA GGCATGGACG
ATTGATGTGG CTAAGGAGGG TATCCAACAG CTCGACGCGG CTGTGTTACG CGACCTTGGG
TTGGACGTTC AGAGCATTCC CCTCAACCGA TTGCGACTTC AGCGTAATGG GCAGGTCTTC
CCACTAGAAC CTGTTATCAG TGGCTCCACG ATCACCGCTC TTCGTTTCTA CGCACCACCA
CCGGGTGATC GCTGGTCGGC TACCGATCGC TATTGGCTGA CCGTGGAAAC GGAGTCAACT
ACTCTTATGT CCGCCCGCGC TGCCCAAATC CAAACCGGAG ATCAACCGGC TGCTATCAGC
ATCAGTGGTG TTTGGCCGTC AGATTCTCCA ACTATCTATG AGTCGACATT ACCCGGGTTC
GATGGCGATC ACTTTTTTAG CCGTCAGATC GACGCTGCTG CAGGTTCGCC GATCAGCACT
ACAGTGACGT TCGCAACTGC CCTACCGTTG GCGCCCACCG ACTCAATGAG CCTTACCTTT
GAGTTGGCAA CGCTGGTGAA ACATAACGGT AATCACCGAT TACGCATCTC TACCGCGACA
GGGTGGGAGA CGACGGTGAC ATGGAACGGC GCTGGCTCGC ATCGCGCAAC GGTGTCCTTA
CCGAGTCCAA CCCGCGAACT CACTTTGACC CTCGATCCTA TCACCGGCAT TGACCGCATA
TATCTCGACC GCATCTTCTT CATCGCTCCG GCTCAAGCCG ATTTTTCATC GACCGGAGCC
ATTTTCAACG GCCAGGCCGG TCGCTTCGCT TACCCAATCA CCGGTGTCTC TACCGGCACT
GCTGTCTACG ATATTACCGA TCCGATGCAA CCGGTGCGCT TGACGTTTAG CAGCAGCTCA
TTCGCCGATG ATTCGCCTAC ACCGCGTCGC TATCTGGTCA CAGGCACAAC GACGCTGCAC
GCACCAACGA TTGCGCGTCA TCAACCGATC GATCTGGCGA CACCACGCGC TGCCCGTGCC
ATTTATATCG CACCGCGCGC GTTCCTGAGT GAACTCGATC CGTTACTTGC TCACCGACAG
GAACAGGGTT GGTCGCCGAT TGCCATCGCC GTTGAAGATA TTTACGCCGG TTGGAGTGGG
GGTGAACCAG AACCGTATGC CATTCGTCAG TTTTTGCGCT ATGCTGCCAC AACCTGGTCA
ACACGACCTG AGGCTGTTAT TTTAATCGGC GATGGGACAT CTGACCCACG TAATTATCTT
GGTCGTGGTT GGCCCAATTT CATTCCACCC TACTTAGCTA CGGTCGACCC GTGGCTCGGT
GAGACGGCAT GCGAGACCTG TTTTGCCCAG CTCGACGGTG ATGACCCTAC CGGCGAGAGC
TTCTTTCAGC CTGATCTCTG GATCGGACGC CTACCGGTCA AATCGGTCAC CGAATTGCGC
GATCTGGTGA ACAAACTACT TATCTATGAA CAGAGCCGTG GGGTTTGGCA ACGTCACGCC
GTGTATCTGG CCGATAATCC TGATACAAGC GGCGATTTTG CCGCGTTGCT TGATGAAGCT
GTCGCTTATC AGCCATTACA CACCAGTTTT AGCCGCGTCT ACTACGACCC AACCGGCTCG
GCGGGTCGTA TTACCGATGC CGTGCTCGCG CGTGAGCAGG CCTTTACTGC TTTTAATCAA
GGAGCCGGCT TACTGGTCTA TGCCGGTCAC GGGCTACAAT TTCAGTGGGC TTTCACCCAA
ATCGGCATAT CCGATCCATT TCTGCTTAAC GTCGATAATG CTACCGATCT GCGGAATGCA
CCGGCGTTTC CGGTCGTACT TAGCATGACG TGTCTTACCG GTGCGTTTCA ACATCCGTCG
TTCCGTGGCA CGACAATCGA TGAAGCACTC GTGTTGAACC CGCTTGGTGG TGCTATCGCG
ACGTGGAGTT CCAGTGGGTT TGGCGTCGCC TACGGTCATC GCCAACTTTT GCTCGGTTTT
GTTGCCGAAC TGTGGAGCGC ACCATCGCCG CCTCTCCTTG GTCAATTAGT CGCTGCCGGC
GTTACCAATT TAGCAATGAG CGGTGAAGCA CCTGAAAGCC TACGCACGTT TCTGTTGCTT
GGCGACCCGC TTACTCCGGT AGTAGCCCGT CCTCTCTACC GTATCGACGT TCCGCTCGTG
CAACGGTAG
 
Protein sequence
MRRFLLYWLT LAAILTGAAP ITSAQPSVQL TFHPSANGIE VVWVGSEQST PQRFWLYLSA 
DTSATPILRS VTDQPLREPL PSPALPVQTF AGETYPPLPQ FLPTVPQSPL RLVSEGYQRG
VRIALYEIAP RYLADTGPRQ ALRLTAFIAG ASLTPPTTRP SPQLAGVPSP DPLAARQAWT
IDVAKEGIQQ LDAAVLRDLG LDVQSIPLNR LRLQRNGQVF PLEPVISGST ITALRFYAPP
PGDRWSATDR YWLTVETEST TLMSARAAQI QTGDQPAAIS ISGVWPSDSP TIYESTLPGF
DGDHFFSRQI DAAAGSPIST TVTFATALPL APTDSMSLTF ELATLVKHNG NHRLRISTAT
GWETTVTWNG AGSHRATVSL PSPTRELTLT LDPITGIDRI YLDRIFFIAP AQADFSSTGA
IFNGQAGRFA YPITGVSTGT AVYDITDPMQ PVRLTFSSSS FADDSPTPRR YLVTGTTTLH
APTIARHQPI DLATPRAARA IYIAPRAFLS ELDPLLAHRQ EQGWSPIAIA VEDIYAGWSG
GEPEPYAIRQ FLRYAATTWS TRPEAVILIG DGTSDPRNYL GRGWPNFIPP YLATVDPWLG
ETACETCFAQ LDGDDPTGES FFQPDLWIGR LPVKSVTELR DLVNKLLIYE QSRGVWQRHA
VYLADNPDTS GDFAALLDEA VAYQPLHTSF SRVYYDPTGS AGRITDAVLA REQAFTAFNQ
GAGLLVYAGH GLQFQWAFTQ IGISDPFLLN VDNATDLRNA PAFPVVLSMT CLTGAFQHPS
FRGTTIDEAL VLNPLGGAIA TWSSSGFGVA YGHRQLLLGF VAELWSAPSP PLLGQLVAAG
VTNLAMSGEA PESLRTFLLL GDPLTPVVAR PLYRIDVPLV QR