Gene Cagg_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1872 
Symbol 
ID7266363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2293783 
End bp2294019 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content55% 
IMG OID643566709 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002463203 
Protein GI219848770 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00550312 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCATACG TCATTACTGA ACCGTGTATC GGTACCAAAG ACGCCTCGTG CGTTGCCGTA 
TGTCCGGTCG ATTGCATTTA CGAGGGTGAC GATCAATACT ACATCAACCC TGATGAGTGC
ATCGACTGCG GCGCGTGTGA GCCGGAATGC CCGGTCGAGG CCATTTTTGC CGATGACGCG
GTGCCGGAGC AGTGGAAGAG CTACATCGAG AAGAACCGTA AGTTTTTTGG GGCGTAG
 
Protein sequence
MPYVITEPCI GTKDASCVAV CPVDCIYEGD DQYYINPDEC IDCGACEPEC PVEAIFADDA 
VPEQWKSYIE KNRKFFGA