Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1860 |
Symbol | |
ID | 7266351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2279222 |
End bp | 2280001 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643566697 |
Product | ABC transporter related |
Protein accession | YP_002463191 |
Protein GI | 219848758 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGC TCGAAGCTAC GAATATTACC AAGATTTTCG GTGGTCTGGT GGCGGTGAAT GATGTGACCT TCACCGTTGA ACCGGGTAGT ATCGTGAGTG TGATTGGCCC TAACGGTGCC GGTAAGACTA CCTTCTTTAA CGTGTTAACC GGTATTTATA AGCCCGATAA GGGGCGGGTT GTCTTTGCCG GGCAAGATAT TACCGGCTGG CGCTCCGATC AGATCGCAGC ACTTGGGATG CGCCGCACCT TCCAGAACAT TCGGTTGTTC GGGAATATGA CGGTGCTCGA AAACGTGCTC GTCGGAATGC ATGTTCATCT CAACGCGCCG ATCTGGAATA TTATCTTCCG TTCGCGTAGT ATGTTGCGTG AAGAAGCAAA GGCGCGTGCT AAGGCGATAG AGTTACTGAA TTTTGTCGGT ATTGCCGATA AACGCGATGA ATTGGCGAAA AATCTGCCCT ACGGTGATCA GCGCCGATTA GAGATTGCTC GTGCGATGGC CGGTGATCCC AAGATCATCT TACTCGATGA GCCAACCGCC GGGATGAACC CGCACGAAAC GATGGAAGCC ACTCACCTAA TCCGTCGCTT ACGCGATGAA CGCGGGATCA CGGTCATTCT GATCGAACAC GATATGCGAC TGGTGATGTC CATCTCGGAA CGGATCTCGG TGCTCGATTA CGGGAGTAAG ATCGCTGAAG GCGATGTTCA GGCGATTCGC ACCAATCCAC GGGTCATCGA AGCGTATCTT GGTAAAGGTG CCGCAAGTCA CGCTGCCTAG
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Protein sequence | MALLEATNIT KIFGGLVAVN DVTFTVEPGS IVSVIGPNGA GKTTFFNVLT GIYKPDKGRV VFAGQDITGW RSDQIAALGM RRTFQNIRLF GNMTVLENVL VGMHVHLNAP IWNIIFRSRS MLREEAKARA KAIELLNFVG IADKRDELAK NLPYGDQRRL EIARAMAGDP KIILLDEPTA GMNPHETMEA THLIRRLRDE RGITVILIEH DMRLVMSISE RISVLDYGSK IAEGDVQAIR TNPRVIEAYL GKGAASHAA
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