Gene Cagg_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1860 
Symbol 
ID7266351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2279222 
End bp2280001 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content53% 
IMG OID643566697 
ProductABC transporter related 
Protein accessionYP_002463191 
Protein GI219848758 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.180905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC TCGAAGCTAC GAATATTACC AAGATTTTCG GTGGTCTGGT GGCGGTGAAT 
GATGTGACCT TCACCGTTGA ACCGGGTAGT ATCGTGAGTG TGATTGGCCC TAACGGTGCC
GGTAAGACTA CCTTCTTTAA CGTGTTAACC GGTATTTATA AGCCCGATAA GGGGCGGGTT
GTCTTTGCCG GGCAAGATAT TACCGGCTGG CGCTCCGATC AGATCGCAGC ACTTGGGATG
CGCCGCACCT TCCAGAACAT TCGGTTGTTC GGGAATATGA CGGTGCTCGA AAACGTGCTC
GTCGGAATGC ATGTTCATCT CAACGCGCCG ATCTGGAATA TTATCTTCCG TTCGCGTAGT
ATGTTGCGTG AAGAAGCAAA GGCGCGTGCT AAGGCGATAG AGTTACTGAA TTTTGTCGGT
ATTGCCGATA AACGCGATGA ATTGGCGAAA AATCTGCCCT ACGGTGATCA GCGCCGATTA
GAGATTGCTC GTGCGATGGC CGGTGATCCC AAGATCATCT TACTCGATGA GCCAACCGCC
GGGATGAACC CGCACGAAAC GATGGAAGCC ACTCACCTAA TCCGTCGCTT ACGCGATGAA
CGCGGGATCA CGGTCATTCT GATCGAACAC GATATGCGAC TGGTGATGTC CATCTCGGAA
CGGATCTCGG TGCTCGATTA CGGGAGTAAG ATCGCTGAAG GCGATGTTCA GGCGATTCGC
ACCAATCCAC GGGTCATCGA AGCGTATCTT GGTAAAGGTG CCGCAAGTCA CGCTGCCTAG
 
Protein sequence
MALLEATNIT KIFGGLVAVN DVTFTVEPGS IVSVIGPNGA GKTTFFNVLT GIYKPDKGRV 
VFAGQDITGW RSDQIAALGM RRTFQNIRLF GNMTVLENVL VGMHVHLNAP IWNIIFRSRS
MLREEAKARA KAIELLNFVG IADKRDELAK NLPYGDQRRL EIARAMAGDP KIILLDEPTA
GMNPHETMEA THLIRRLRDE RGITVILIEH DMRLVMSISE RISVLDYGSK IAEGDVQAIR
TNPRVIEAYL GKGAASHAA