Gene Cagg_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1859 
Symbol 
ID7266350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2278421 
End bp2279137 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID643566696 
ProductABC transporter related 
Protein accessionYP_002463190 
Protein GI219848757 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC TTGAATTGCA GAATGTTCAT ACCTACTACG GAAAAATTCA CGCACTAAAG 
GGCATCTCGA TGACGGTCGA GAAGGGCGAA ATCGTTACCC TGATCGGCTC GAATGGCGCC
GGTAAAACCA CGACGTTGCG GACAATCTCT GGGTTGCTGA AGCCACGTCA AGGACAGATT
CTCTTCAAGG GGCAGCGAAT CGATACCTTG CCACCACACG AAATTGTTAA GTTGGGCATT
GCCCAGTCGC CTGAGGGGCG CCGCATTTTT CCACGTCTCA CCGTACTTGA AAATCTTGAA
ATGGGGGCAT TCCTCTACAA CACTCGAAGC CCAGAATATC AGGCCGACCT TGATCGTGTG
TTAACCCTGT TTCCCCGCTT GCGCGAGCGT GTAAGTCAGA AGGGTGGCAC GTTGTCCGGT
GGGGAGCAGC AGATGTTGGC AATCGGACGC GCTTTGATGA CCCGTCCGCA GGTGCTCTTA
CTCGACGAGC CTTCAATGGG TTTGGCACCG GTGCTGGTCG AGCAGATTTT TGAGATCATT
CAAACAATTA ATCAGCAAGG GACGACGGTG CTATTAGTTG AGCAAAATGC CTTGCAGGCG
CTTTCAATCG CACACCGCGG TTATGTGTTG CAGAGTGGTG CGATTGTACT CGAAGATAGT
GCCACTAATC TGCGTAATAA CGAGATGGTG CAGAAAGCCT ATCTGGGGTT AGATTAG
 
Protein sequence
MALLELQNVH TYYGKIHALK GISMTVEKGE IVTLIGSNGA GKTTTLRTIS GLLKPRQGQI 
LFKGQRIDTL PPHEIVKLGI AQSPEGRRIF PRLTVLENLE MGAFLYNTRS PEYQADLDRV
LTLFPRLRER VSQKGGTLSG GEQQMLAIGR ALMTRPQVLL LDEPSMGLAP VLVEQIFEII
QTINQQGTTV LLVEQNALQA LSIAHRGYVL QSGAIVLEDS ATNLRNNEMV QKAYLGLD