Gene Cagg_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1835 
Symbol 
ID7267747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2251168 
End bp2252163 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content56% 
IMG OID643566671 
Productanti-sigma-factor antagonist 
Protein accessionYP_002463166 
Protein GI219848733 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCG ATCAGCGACA GTTGGCATTC GCCCTGATGG GTGGTATGGC CGCCTATACG 
TTCATCCGTG GATTATTGAA TTTACTCGTG GATAACCCGC CACGTACAAT CATCCTATCG
CTACTCGTCT CGGCGATTTT TGGTGTGGCA ACCTGGCTGT ATTGGCGCGG CTGGGAAAGT
GCCCGGTTTT TTGCGACCGG CGGTGTTGCT TTTGTGGTCG CTTCTAGCTT ACCGCTCACG
CGAGAGACGT TGGTGCTGTT TACACCCATT GCCTTCGCCG TTGCCATCAC CAACACCCAA
TGGGTCGCCG GTATTGGCGC CGCGATGCTT ATCGGTTTGC TTGGTCGTGA TCTGTTCGAG
AACGGTTCGC TGGATAGCGT CTATGCCAAT GTGGCAGTGG CAGCAAGTTA CATCGTGCAG
GTGGTGGTCT TCGCTGCAGC CCGCTATGCA ATGGATACAG CCCGTATCGA AGCTGAACAG
AACGCGACGA GCGCTGAAGC AGCGCGTGCC GAAATTGCCG AGCGGGTAGC GGCGATTGAG
CAACAACGCA AGGAATTGGC CGAGCAGAAT CAGCGCCAGC AAGAGCTGCT CGAGCTGGTT
AGTCAATTAG AGACACCGGC GGTACGCATT GCCGAAGGAG TGCTGCTTGC ACCATTGGTT
GGTGGAATTG ATAGCCGACG GGCCGGTAAG ATCACCGGTC GCTTACTCGA GCTTGTGCAT
GAGCGGCGCG TCAATCTGGT TATTCTCGAT GTCGCCGGCG TGCCGGTAAT CGATACAGCG
GTAGCAAATG CGCTGACCCA AACCGTGCGC GCATTGCGAC TACTCGGGTG TCGGGTCATC
TTGACCGGGG TTTCGGCACA GGTCGCGTTA ACGCTGACGC ACATTGGTAT TGAACTGAGT
GAACTCGATG TAGCGGCATC GCCCCAAGAA GCGTTGCAAC GTTGGATGGA CGAGCAGGTA
AAGGTTGTAC GGAAGCAACG CAGTGATCTA AACTGA
 
Protein sequence
MKIDQRQLAF ALMGGMAAYT FIRGLLNLLV DNPPRTIILS LLVSAIFGVA TWLYWRGWES 
ARFFATGGVA FVVASSLPLT RETLVLFTPI AFAVAITNTQ WVAGIGAAML IGLLGRDLFE
NGSLDSVYAN VAVAASYIVQ VVVFAAARYA MDTARIEAEQ NATSAEAARA EIAERVAAIE
QQRKELAEQN QRQQELLELV SQLETPAVRI AEGVLLAPLV GGIDSRRAGK ITGRLLELVH
ERRVNLVILD VAGVPVIDTA VANALTQTVR ALRLLGCRVI LTGVSAQVAL TLTHIGIELS
ELDVAASPQE ALQRWMDEQV KVVRKQRSDL N