Gene Cagg_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1827 
Symbol 
ID7267739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2239568 
End bp2239903 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content56% 
IMG OID643566665 
Productanti-sigma-factor antagonist 
Protein accessionYP_002463160 
Protein GI219848727 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTA CCGTCAACCC GATGAATGAA CGCGCCGTTG TAGTCCAACT GCGTGGCCGT 
CTCGATCTCT TGGTGGCTAC CGAAGTGAAG CAGCGTTTAT CCCAGATCGT TAGTGACGGG
TTCCGCTTGA TTGTCGTTGA TATGGGGGAG GTCAGTTTTG TGGATAGTTC GGGATTAGGT
GCGCTGATCG GCGGTCTGAA AGCAGCACGG CTCGCCGGCG GTGATCTGCG CCTGGCCAAC
CTGAACGCCC AAGCCCAGGC GATTTTAGAA TTGACAACGC TCAATCGCGT CTTGCGTCCG
TACCCCAACG TAGACGAAGC GTTGCACGCT GTGTGA
 
Protein sequence
MEITVNPMNE RAVVVQLRGR LDLLVATEVK QRLSQIVSDG FRLIVVDMGE VSFVDSSGLG 
ALIGGLKAAR LAGGDLRLAN LNAQAQAILE LTTLNRVLRP YPNVDEALHA V