Gene Cagg_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1824 
Symbol 
ID7267736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2237418 
End bp2238590 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID643566662 
Productglycosyl transferase family 9 
Protein accessionYP_002463157 
Protein GI219848724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTCGCG TCACCGGTTT GCGTCTTCGC ACCCATCCAA GCACTATGCG AGCATTGTTT 
CTTCATCTCC TCGCCACGGT TGCTCAACCT TTGGTACGGC GCGCAAACGC GCATCCGCCA
CGGCGTATTC TGATCATCAA GCCCGACCAC TTAGGTGATC TGCTGCTCGC GACACCGGCC
CTGGCAGCGC TCCGCGCTGC CTTACCGACG GCGCACATCA CTGCTCTCGT TGGGCCATGG
GCTGCGCCGA TGTGGCAACG CTCGCCCGAA CTCGATGCAC TGGTTACGTT GCCCTTTCCG
GCGTTCGATC GCTCCGCTGC CAAACCATCA CGCCTCGCGC CTTACCTGCT CTTGCTGCGC
GAAGCGTTAC GCTTACGCCG CCAGCGCTTC GATGCCGCGC TCATCATGCG CGACGATCAC
TGGTGGGGGG CTGCGCTGGC CCTATTGGCC GGTATCCCTC GTCGAATCGG CTTTGCCCAT
CCCCTCTGCC GGCCTCTGCT CAGCGAGGCA CTAGACTATC ATCCGCGGCA ACACGTTACG
CAACAGGCGC TCGATCTGGT CGCAGCGCTC ACCGGTCATC GCCCACCACC GGCGCCGTTG
CGCTTCTCAC CGACGCCTGC TGCGCGTGAA TGGGCTGCTG CATGGCATCA GACGCACGTC
GCGCCGAATG AGCAGTTAAT CATCATCCAT CCCGGTACCG GTGGGCCAAC GAAGCACTGG
TTGCACAGCT ACTGGATCGC CCTTATTCAA AGCTTGCGTC GGCCTCGGCG GCGTTTTTTG
CTCACCGGTA GTCCTGCCGA GCACGCTGCA TTGGCCGCGC TTGCCACCGA ATTACCCGAT
GTCTCGCTGC TCAGTAGCGA GATGACCATC GACCGCCTTG CTGCGCTGTT TGCCTATGCC
GAGTTGGTGA TCGGTGTCGA TAGTGGCCCA CTGCACATTG CTGTTAGTCA GGGTGTACCG
ACCATTCACC TGTTTGGGCC GAGTGATCCA CTTCGTTTCG GGCCGTGGGG TGATGGATCG
CGGCATCACG TATTGAGCGC CGGGATCGCG TGCAGTCCAT GCGGGGTCTT TGCCGCCTGC
CCACGTGCGA CCGATCCGCC CGAATGCATG GTAGCACTTA CCCCGGCACA TGTCGTGGCG
GCTGCCGAGA CGTTATTGGC AACCGTGAGG TAG
 
Protein sequence
MTRVTGLRLR THPSTMRALF LHLLATVAQP LVRRANAHPP RRILIIKPDH LGDLLLATPA 
LAALRAALPT AHITALVGPW AAPMWQRSPE LDALVTLPFP AFDRSAAKPS RLAPYLLLLR
EALRLRRQRF DAALIMRDDH WWGAALALLA GIPRRIGFAH PLCRPLLSEA LDYHPRQHVT
QQALDLVAAL TGHRPPPAPL RFSPTPAARE WAAAWHQTHV APNEQLIIIH PGTGGPTKHW
LHSYWIALIQ SLRRPRRRFL LTGSPAEHAA LAALATELPD VSLLSSEMTI DRLAALFAYA
ELVIGVDSGP LHIAVSQGVP TIHLFGPSDP LRFGPWGDGS RHHVLSAGIA CSPCGVFAAC
PRATDPPECM VALTPAHVVA AAETLLATVR