Gene Cagg_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1797 
Symbol 
ID7267709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2204192 
End bp2204944 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID643566637 
ProductHpcH/HpaI aldolase 
Protein accessionYP_002463132 
Protein GI219848699 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.203446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.716288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA CGATCCGCCA ACAGTGGACC AGCGGCGCCG TCGTCTACAA TGCGTGGCTG 
ACCATCCCTA GCCCGTGGAG CGCCGAATTA CTCGCTACCG CCGGCTTCCC TTCGCTCACC
ATCGATTTAC AGCACGGCCT CATTGACGAC CCGACCGCAT TGCAGATTCT GCACACCATC
GATCAGCGCC GCTGTCCGGT ATTTGTACGG TTAGCGTGGA ACGAACCGGC AGCGATTATG
CGAGCATTAG ACCGCGGCGC AGCCGGGATT ATCGCGCCGC TGATCAATGG CCCCGACGAT
GCACGGGCAT TGGTTGCAGC CTGCCGCTTT CCGCCGGAAG GCATCCGTAG CTATGGCCCG
GTGCGGGTCG GGGTGGCTCA TGGCGTCGCC GAACCGGCTG CGGTGGCACG GCTGCCGGTG
CTGATGCCGA TGATCGAGAC GGCAAACGCG ATGGAGCAGC TTGAGGCAAT TGCCGAGGTA
CCCGGCATTG ATGGCCTCTA CGTCGGGCCG GCCGACCTGA GTTTGAGCCT CGGCCTACCG
GTGCCGGTCG ATTTTTCCGC ACCTTCCTTC CGGGCTGCAC TCAGCCGGAT CGTCGCCGTC
TGCCGGCAAC GTGGGCTTGC AACCGGCATC TACGCCAACC CCGATCTCGC CGCCGATTTG
GCCGCACTCG GCTTCAATTT CATCACGATT GTGAATGATG GGGATTTGAT TATGAAAGGG
GCTGTTGCCG CTTTGCAAAC GGTACGGGCA TAG
 
Protein sequence
MIDTIRQQWT SGAVVYNAWL TIPSPWSAEL LATAGFPSLT IDLQHGLIDD PTALQILHTI 
DQRRCPVFVR LAWNEPAAIM RALDRGAAGI IAPLINGPDD ARALVAACRF PPEGIRSYGP
VRVGVAHGVA EPAAVARLPV LMPMIETANA MEQLEAIAEV PGIDGLYVGP ADLSLSLGLP
VPVDFSAPSF RAALSRIVAV CRQRGLATGI YANPDLAADL AALGFNFITI VNDGDLIMKG
AVAALQTVRA