Gene Cagg_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1752 
Symbol 
ID7269458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2142453 
End bp2143412 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID643566594 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002463089 
Protein GI219848656 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.17237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGTT ATCTGATTCG GCGAATAGTC TTACTCGGAG TGACGTTTCT GATCAGTTCG 
TTGATCATCT TTCTCATCTG CCGGCTCTTA CCCGGCGATG TGGCACGGGT ATTGTTAGGG
CGCGAAGCCG GCGAGGCAGC CCTCGCCGGA CTACGCGCCG AACTAGGCCT CGACCGCCCA
TTGCCCATTC AGTATCTCGA TTGGCTACGC GGCTTTTTCA GCGGTGATTG GGGTATCTCG
TACAGTACCC GCCAGCCGAT TCGTCCTCTC GTGCTTGAGC GGCTAGGCAA TTCACTACTC
CTTGCCGGTG TTACCCTCAC CCTCGCCTTA CCCCTCGGTA TTGGGCTGGG CGTTTGGGCC
GGCTGGCGGG CCGGAAAACC CGACGATACG ATGATTAGTG TCGCGACCCT CGCCGTGACC
GGTTTACCGG AGTTCGTCAC CGGCTTATTA CTGATCGACA TCTTCGCATT CCGTCTGCGG
TGGCTGCCTG CCAATTCCTC CATTCGGCCC GATGCAACTC TGCTCGACAT TGTTCCCCAA
CTGATCTTGC CCGCTATTAC CGCTACACTC GTTTTGCTCG CCTACATTGC CCGCCTTACG
CGCACCGGGG TTGTCACCGA ATTAGGGCAA GAGTATGTCC GCACTGCGAT GCTCAAGGGT
CTCACTCCGC TATCGATCTT GAGCCGTCAC GTGTTACGCA ATGCTCTCCT GCCTACAATC
ACGGTGATTG CGATCAGTTT TGGCTGGTTG ATCAGCGGAT TGATCGTGGT GGAAAATGTG
TACAACTATC CCGGCATCGG TCGTTTGCTC ACGTTCGCAA TCGACCGCCG AGATCTGATC
TTGCTCCAAG CAGTTGCAAT GGTTACCGTC ATGATCTTTG CGGTAGCAAA CCTTGTGGCC
GATCTGCTCT ATGCGTTCCT CGATCCTCGT ATCCGGCTGG GACAGGAAAC AGAATACTAG
 
Protein sequence
MVRYLIRRIV LLGVTFLISS LIIFLICRLL PGDVARVLLG REAGEAALAG LRAELGLDRP 
LPIQYLDWLR GFFSGDWGIS YSTRQPIRPL VLERLGNSLL LAGVTLTLAL PLGIGLGVWA
GWRAGKPDDT MISVATLAVT GLPEFVTGLL LIDIFAFRLR WLPANSSIRP DATLLDIVPQ
LILPAITATL VLLAYIARLT RTGVVTELGQ EYVRTAMLKG LTPLSILSRH VLRNALLPTI
TVIAISFGWL ISGLIVVENV YNYPGIGRLL TFAIDRRDLI LLQAVAMVTV MIFAVANLVA
DLLYAFLDPR IRLGQETEY