Gene Cagg_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1725 
SymbolcysS 
ID7269431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2109351 
End bp2110769 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content56% 
IMG OID643566567 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_002463062 
Protein GI219848629 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC ACCTCTACAA TACCTTGACC CGGCGGCTTG AACCGTTAGA GACGATTGAG 
CCTGGTGTTG TCCGTATGTA CGTCTGTGGG GTGACACCCT ATGACGAAGC GCACATCGGG
CATGCGATGT CGGCGATTGT GTTTGACATG ATCCGGCGCT ATCTTGAATT TCGTGGTTAT
CAGGTGCGCC ATATCGTCAA TTTTACCGAC ATTGATGATA AAGTGATCGC CCGCGCGCAA
GCGATGGGGC AAGATCCGCT CGCGCTCTCC GGCCAGTATG CTGCCGAATT TTTGACTCAG
TTGCAGGCAA TGAATGTCTT GCCGGCTACA GCCTATCCGC GTGTCTCGAC GACGATGCCT
GGTATTATCG CGTTTGTGCA AGGCTTGATC GAGCGCGGCT ATGCGTATGT GGTCGATGGC
GATGTCTATT TTCGGGTGAA GCGCGACGAA GACTACGGTA AACTCTCCGG TCGCTCGCTC
GATGAGATGC TCAGTGGTAC GCGCTTTGAG GTTGATCCAC GTAAAGAGTC ACCGGCTGAT
TTCGCTTTGT GGAAAGCGGC TCGACCGGGT GAACCGGCGT GGGATAGTCC ATGGGGGCCG
GGACGTCCGG GTTGGCATAT TGAGTGCTCG GCGATGGCGA TGGAGTACCT CGGACCGCAG
ATCGATATTC ACGGCGGCGG TACCGATCTC ATCTTCCCTC ATCACGAAAA TGAGATTGCC
CAAAGCGAAA GTTTGACCGG TCAGCCTTTT GCCCGTTATT GGGTGCATAA CGGGATGTTG
CAGTTGGTCA ATCCACAGAC CCGGCAAGTT GAGAAAATGT CGAAGTCGCT GGGGAATGTG
GTGACGATTG CCGATTTTCT CAGCCGATAC GATCCCGACG TGTTTCGGCT GATCGTCTTG
AGTAGTTCAT ACCGTAGCCC GTTGACCTAT AATGACGAGA TTGCCGCCGA TAATCAGCGC
AAGCTGGAAC GACTTTTATC GGCGTTGGCA CCGGCTACCG GTTCGGTGCG CGAGGGGCCG
GCAGTAGCAG CGTTGCGTGA AGCAGCTACC ATTGCCCGCG AACGGTTTAT TACGGCAATG
GATAACGACT TTAACAGCCC GGCAGCGCTC GCCGCACTGT TCGATCTGGT ACGGGCGATT
AATGCGGCCC GCGACGCCGG TCTTGCTGCC GAGGAGCTTG CCATCGGTCA GCAGACGCTC
CGTGAATTGG CCGGGGTGTT GGGGTTGCGG TTGCAACCGC GCCAACGCAC ACCGACTGCC
GAAGTGACAC CGTTTATCGA GTTGCTGATC GAGGTGCGGG GTGAGTTGCG GAAGGCTAAG
CAGTATGCAC TGGCCGATCT GGTGCGTAAC CGGCTGGCCG ATCTTGGTGT CGCCCTTGAA
GATGGTCCAC ACGGAACGCG CTGGAAGTGG CAGGGATGA
 
Protein sequence
MTIHLYNTLT RRLEPLETIE PGVVRMYVCG VTPYDEAHIG HAMSAIVFDM IRRYLEFRGY 
QVRHIVNFTD IDDKVIARAQ AMGQDPLALS GQYAAEFLTQ LQAMNVLPAT AYPRVSTTMP
GIIAFVQGLI ERGYAYVVDG DVYFRVKRDE DYGKLSGRSL DEMLSGTRFE VDPRKESPAD
FALWKAARPG EPAWDSPWGP GRPGWHIECS AMAMEYLGPQ IDIHGGGTDL IFPHHENEIA
QSESLTGQPF ARYWVHNGML QLVNPQTRQV EKMSKSLGNV VTIADFLSRY DPDVFRLIVL
SSSYRSPLTY NDEIAADNQR KLERLLSALA PATGSVREGP AVAALREAAT IARERFITAM
DNDFNSPAAL AALFDLVRAI NAARDAGLAA EELAIGQQTL RELAGVLGLR LQPRQRTPTA
EVTPFIELLI EVRGELRKAK QYALADLVRN RLADLGVALE DGPHGTRWKW QG