Gene Cagg_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1722 
Symbol 
ID7269428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2106517 
End bp2107272 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content58% 
IMG OID643566564 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_002463059 
Protein GI219848626 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGATC CAACGACCAT TCCCAATACC CACCGCTTCT TTGTTGATCC GGTATGGTTG 
CGTGGTGACG AAATCTTGAT TGATGATCCG TCACTGCTGC ACCAATGGAC TCGTGTGCTG
CGCCTGACCG CCGGGGATCG AGTGTTGCTG CTCGATGGGA AAGGGATGGC GGCAGTTGTG
CAATTCACCG CCATCGACCG GCGGCGGGCG CAGGGATACG TCCTCACTCG TTGTCACGCC
GGTGGCGAGT TGGCAGTTGT AATCGATCTC TATCTGGCGC TAATCCGGCC CGAACGGTTT
GAATGGGCGT TGCAAAAGGC GGTAGAATTG GGGGCACGTC GCATTATACC GGTCGCTTTT
GCCCGCTCGT TGTCGGGTGA TCGGATTGAC ACCCATCGAC TGATGCGCTG GCAGCGGATT
GCTACCGAAG CGGCCGAGCA GTCTGGGCGT GGCCGCTTAC CCGAAGTGAG CGCTCCGCAA
CCGTTTTCGG CTGCGGTGGT TGCCGGTGGT CGTGCCGATT TGGCGCTTAT GCTCGATGAA
CAAGCTGAAC ATCATTTGCG TGATATTGTA ACATCGCCGA CCTCGCTACG TCAGATTGCC
ATCATCTCAG GCCCGGAAGG CGGCATTGAT CCGCGTGAAC GACGGGCGGC AATCGATCAT
GGGTTTGTGG CGGTTTCGTT GGGGCCACGC ATCTTGCGGG CAGAAACGGC GCCGTTAGCG
GCGTTGGCAA TGTTGCAATA TGCGCTACAT ATCTAG
 
Protein sequence
MDDPTTIPNT HRFFVDPVWL RGDEILIDDP SLLHQWTRVL RLTAGDRVLL LDGKGMAAVV 
QFTAIDRRRA QGYVLTRCHA GGELAVVIDL YLALIRPERF EWALQKAVEL GARRIIPVAF
ARSLSGDRID THRLMRWQRI ATEAAEQSGR GRLPEVSAPQ PFSAAVVAGG RADLALMLDE
QAEHHLRDIV TSPTSLRQIA IISGPEGGID PRERRAAIDH GFVAVSLGPR ILRAETAPLA
ALAMLQYALH I