Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1722 |
Symbol | |
ID | 7269428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2106517 |
End bp | 2107272 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643566564 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002463059 |
Protein GI | 219848626 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGATC CAACGACCAT TCCCAATACC CACCGCTTCT TTGTTGATCC GGTATGGTTG CGTGGTGACG AAATCTTGAT TGATGATCCG TCACTGCTGC ACCAATGGAC TCGTGTGCTG CGCCTGACCG CCGGGGATCG AGTGTTGCTG CTCGATGGGA AAGGGATGGC GGCAGTTGTG CAATTCACCG CCATCGACCG GCGGCGGGCG CAGGGATACG TCCTCACTCG TTGTCACGCC GGTGGCGAGT TGGCAGTTGT AATCGATCTC TATCTGGCGC TAATCCGGCC CGAACGGTTT GAATGGGCGT TGCAAAAGGC GGTAGAATTG GGGGCACGTC GCATTATACC GGTCGCTTTT GCCCGCTCGT TGTCGGGTGA TCGGATTGAC ACCCATCGAC TGATGCGCTG GCAGCGGATT GCTACCGAAG CGGCCGAGCA GTCTGGGCGT GGCCGCTTAC CCGAAGTGAG CGCTCCGCAA CCGTTTTCGG CTGCGGTGGT TGCCGGTGGT CGTGCCGATT TGGCGCTTAT GCTCGATGAA CAAGCTGAAC ATCATTTGCG TGATATTGTA ACATCGCCGA CCTCGCTACG TCAGATTGCC ATCATCTCAG GCCCGGAAGG CGGCATTGAT CCGCGTGAAC GACGGGCGGC AATCGATCAT GGGTTTGTGG CGGTTTCGTT GGGGCCACGC ATCTTGCGGG CAGAAACGGC GCCGTTAGCG GCGTTGGCAA TGTTGCAATA TGCGCTACAT ATCTAG
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Protein sequence | MDDPTTIPNT HRFFVDPVWL RGDEILIDDP SLLHQWTRVL RLTAGDRVLL LDGKGMAAVV QFTAIDRRRA QGYVLTRCHA GGELAVVIDL YLALIRPERF EWALQKAVEL GARRIIPVAF ARSLSGDRID THRLMRWQRI ATEAAEQSGR GRLPEVSAPQ PFSAAVVAGG RADLALMLDE QAEHHLRDIV TSPTSLRQIA IISGPEGGID PRERRAAIDH GFVAVSLGPR ILRAETAPLA ALAMLQYALH I
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