Gene Cagg_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1712 
Symbol 
ID7269418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2093227 
End bp2094564 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content56% 
IMG OID643566554 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002463049 
Protein GI219848616 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.200643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CCACCAACAC GGCAACCGCA ACTACGCAAC TATCTGCCAC TCCTGCTGCC 
ACGGATCAGA TCACCTCATT ATCACCATCA GAAGTTCAGC GCGGCATGAT CATTTCCATC
TGGGAAGGCG CAATTGCCAA CATTCACATC AGTATCACAG GTGCAATCGG CGGCAGCGTA
TTTCTCAGCG GATTTGCCCT TTTGCTCGGT GCGAACACCT TTCAGATCGG CCTCCTCGGC
GCTTTGCCGT TCATCGGACA GTTCTTTCAG TTTCTGAGCG CGTACCTCGA AACTCGCTTT
GCTAAGCGCC GCCCGATCGT GTTATACACG GCGCTGACCG GACGTTTGGT ATGGGCCTTC
CTCCTTTGGT TACCCTTCAC CGGCTGGCCG GCAGCGTGGC AGTTGAATAT GTTCTTTATC
GCACTCGGTT GTTCGTATGC ACTCAACGGC ATGGCCGGTA ACGCATGGAT GAGTTGGATG
AGCGATCTGG TGCCGTCCAA CCGGCGCGGC AGCTATTTTG GTTGGCGTAA TACGATTGCC
GGTCTGAGTA GCATGGTGAG CGTTTATCTA GCCGGATTAA CGCTCGATCA CTTTCGCATG
AATCACGCGG AGGCCCAAGG GTACGCCGTG ATCTTCGGGG TCGCAGTGGT GGCTGCGTTT
GGAGCAGCCC TGCTGATCGC ACGCCAGCCT GAACCACCCT TAACACCACG CCCGTGGGAA
GGAGTTGGCA CATTTCTCTT GAGTCCGCTA CGCGATGATG TATTCCGCCG CTTTACAATA
CTGGCTACTG CGTGGGCCCT CGTGACCGGT ATCGCTGCGC CGTTTTTCAA CATCTACGGC
CTCACCACCT TGCAACTTGA TTTCTCATTG CTGGCCTTGA CCGGTATCGT AACAAATACC
GTGGCGCTCG TCTTTTCGCC GTTGGTCGGC TGGCTGATGG ATCGCTACGG CTACCGGCTC
GTCGTGGCCG TTTGTGTGAT CGGGACGATT CCATTGCCAC TCGGTTGGGT TCTCTCAACA
CCGCACAATA TCGTACCGTT ATGGCTTACC TCGATCTTTT CGGGTGTCTT CTGGCCGGGG
GTGAACCAAG GTCTTGGCAA TCTGCTGATG GAACGAGCAC CGGCAACCCA ACGGGGAACG
GCGATGGCGA TCTTTAGCCT CATAACCGGT CTTGGTACGC TCATTGCCTC ATTAGCCGGA
GGTGCGCTCG GTCAGACGAT GAGTCAAACA ACGCTTCACC TTGGGCCACT GACAGTCGGT
GGTTTGGCCG GGTTATTTGT CTTGACCATG CTCGGTCGCA TGGTAATGGC CGGTGTGTTT
TGGCGAATCT TACGTTAG
 
Protein sequence
MSSTTNTATA TTQLSATPAA TDQITSLSPS EVQRGMIISI WEGAIANIHI SITGAIGGSV 
FLSGFALLLG ANTFQIGLLG ALPFIGQFFQ FLSAYLETRF AKRRPIVLYT ALTGRLVWAF
LLWLPFTGWP AAWQLNMFFI ALGCSYALNG MAGNAWMSWM SDLVPSNRRG SYFGWRNTIA
GLSSMVSVYL AGLTLDHFRM NHAEAQGYAV IFGVAVVAAF GAALLIARQP EPPLTPRPWE
GVGTFLLSPL RDDVFRRFTI LATAWALVTG IAAPFFNIYG LTTLQLDFSL LALTGIVTNT
VALVFSPLVG WLMDRYGYRL VVAVCVIGTI PLPLGWVLST PHNIVPLWLT SIFSGVFWPG
VNQGLGNLLM ERAPATQRGT AMAIFSLITG LGTLIASLAG GALGQTMSQT TLHLGPLTVG
GLAGLFVLTM LGRMVMAGVF WRILR