Gene Cagg_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1701 
Symbol 
ID7269407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2077270 
End bp2078031 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content54% 
IMG OID643566543 
Productprotein serine/threonine phosphatase 
Protein accessionYP_002463038 
Protein GI219848605 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT TAGAGATGTA TGTAGCAGTT GCCAAAGTTC CCCGCTCTGG CGAGCTAGAG 
AGCGGCGATA CGATTGAAAT GATTGAGCGT CCGGGAGGCG GTTTTTCGTT TGTCTTGGTT
GATGGGCAAG GGAGTGGGCG TGCAGCGAAA ACCCTATCGC ATCTGGTGGC GACTCGTGCG
ATCACCTTAT TGAAGGATGG TGCTTATGAC GGAGCGGTGG CACGTGCTGT CCATGACTAT
CTCTATACCT ACCGGATGGG TCAGGCTGCA GCAACGCTTA ACATCCTCTC GGTTGATTTT
GCCGCTCACA AAATAATTGT GACACGTAAT AACCCGGCGC CGTTTTTTGT GCTAACGCCA
CAAGGGATGC GCAGTTTTAG CGCTCCGTCA GAGCCGATTG GGTTACAGCC ACTGATCAAG
CCGCAGATGT GTGAGTTGCC GATTACGGCC TACACGTATG TGGTGATGTT TACCGATGGC
TTGTTACGGG CCGGCGAGCG GCGGGGGGAA GATCTGGGAT TACCGAACTA TCTGGCAGCG
TGGCCGGCCC ATGAGGGGCG CAATCCACAA ACGCTCGTCG AGAGTATTAT GCAGCGGGCA
CTAATGCTTG ATGAGGATGA ACCGAGTGAT GATATGAGTG TGGTTGTGCT CGGTATTTTG
CCGGCAGATG ATGTGCCCGG TTTGCGTCGG TTGATAGTGA GTGCGCCGAT TATTGCGACC
GGTCCTGCCG AGCCGCCTGA GGAACCAGAT GTGGTGAAGT AG
 
Protein sequence
MADLEMYVAV AKVPRSGELE SGDTIEMIER PGGGFSFVLV DGQGSGRAAK TLSHLVATRA 
ITLLKDGAYD GAVARAVHDY LYTYRMGQAA ATLNILSVDF AAHKIIVTRN NPAPFFVLTP
QGMRSFSAPS EPIGLQPLIK PQMCELPITA YTYVVMFTDG LLRAGERRGE DLGLPNYLAA
WPAHEGRNPQ TLVESIMQRA LMLDEDEPSD DMSVVVLGIL PADDVPGLRR LIVSAPIIAT
GPAEPPEEPD VVK